Kozakia baliensis: A0U89_07305
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Entry
A0U89_07305 CDS
T04547
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kba
Kozakia baliensis
Pathway
kba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U89_07305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kba03019
]
A0U89_07305
03400 DNA repair and recombination proteins [BR:
kba03400
]
A0U89_07305
Enzymes [BR:
kba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0U89_07305
Messenger RNA biogenesis [BR:
kba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0U89_07305
DNA repair and recombination proteins [BR:
kba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0U89_07305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOX18184
UniProt:
A0A1D8UX08
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All DBs
Position
1567648..1569462
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AA seq
604 aa
AA seq
DB search
MRFENATPEDVLSRIFGFSSFRGFQAEAVASAMRGEDALVLMPTGGGKSVCYQIPALCRP
GMGLVISPLIALMDDQVAALRQLGVNAAALHSELEADELARIRSDLNRGALEILYISPER
LLSPGTSAWLSRQRLSIIAVDEAHCISAWGHEFRPEYRALANLPEIFPGVPRMALTATAD
PRTREDILQALGMVDSKQLTASFHRPNLYIFVRPKTSEIRQLTEALANRGDGASIVYCGS
RNKTERIAKSLRDKGFTALPFHAGLSPQEKRAILTRFRSGEPIVIVATIAFGMGIDRPDV
RCVVHLDMPSSPEAYYQQIGRAGRDGQRADTVLLYGGEDMARARYWLEQSNAPDSEKRVM
QQRLESMIAFTETTGCRTQALLACFGENFPTPCSHCDNCLSPISVFDGTEAAQKVLSAVY
RTNQRFGAVHLTTVLRGKMTEAVERHAHQHLSVFGVGRDRSEAWWRGIIRQLIARGALRM
SGEHNTLGLSPEVARPILRGEEKVMLREDPIATLRTGAALNTARAEQDDLPEEARPRFDV
LRAWRLSEAREQEIPPYIIFHDVVLREIAKEFPTTLEHLGRIRGVGGSKLERYGDAVLAA
LRQI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atacgctttgaaaatgcgacgcccgaagatgtgctgagtcgcatcttcggcttttccagc
tttcgcggttttcaggcggaagctgtcgcctcggccatgcgtggcgaggatgcgctcgtg
cttatgcccactggcggcggcaagagcgtctgctatcaaatccccgcgctttgccgccct
ggaatgggcctggtcatctcaccgctgatcgccttgatggacgatcaagtggctgcactg
cgccaactcggcgtcaatgctgccgcgctgcattcggaactcgaagcggacgaactggcc
cgcattcgctctgacctcaatcgcggcgctttggaaatactgtacatctcacctgagcgt
cttttgtcgcctggcaccagcgcttggttgagccgtcagcggctgtcgattatcgccgtg
gatgaggcgcactgtatttctgcctggggtcatgaattccggccggaataccgcgcttta
gcgaatctgccggaaatcttccccggcgttccccgtatggcgctgacggcaacggccgat
cccagaacgcgcgaggatattctccaagctttgggcatggtcgactcaaagcaactaacg
gccagttttcatcggcccaatctttatattttcgtacgtcccaagacatctgagatccgc
caacttaccgaggcgcttgccaatcgaggcgatggcgcttccattgtgtattgcggcagc
cgcaacaaaaccgaacgcatcgcaaaaagcctgcgggacaagggcttcaccgccttacca
ttccatgctggcttatcgcctcaagaaaaacgcgccattctcacgcggtttcgtagcggc
gagccgatcgttatcgtagcgaccatcgctttcggcatgggcatcgaccgacccgacgtg
cgttgtgtcgtgcatttggacatgccttcctcgccagaagcctattatcagcaaataggc
cgtgccgggcgtgacgggcaaagagctgacaccgtgctgctttatggcggcgaggacatg
gcgcgtgcgcgttattggctggagcagtccaacgcgccggacagcgaaaaacgagtcatg
cagcaacggctcgaaagcatgatcgctttcaccgagaccacaggctgccgcacccaggcg
cttcttgcctgctttggggagaactttcctacgccttgcagtcattgcgataactgcctc
tcaccaatatccgttttcgatggcacggaggctgcgcagaaagttctttctgccgtttat
cgtacgaaccaacgttttggagcagtgcatctcaccaccgttctacgtgggaaaatgacg
gaagccgtagagcggcatgcccatcaacatctttccgttttcggcgtcggtcgagacaga
agcgaggcatggtggcgagggattattcgccagctcatcgccagaggcgctctgcgcatg
agcggggagcacaacactctgggcctttcgccggaagttgcacgtcccattcttcgtggc
gaagagaaggttatgctgcgtgaagatcctatcgccactttgcgcaccggtgctgcactc
aacacggcacgcgccgagcaggacgatcttccagaagaagcgcgcccacgtttcgacgtt
ctgcgcgcctggcggctctcagaggcgcgcgaacaagaaattccgccctacattatcttt
catgacgtcgttctacgcgaaatcgcgaaggaatttccgacgaccttggaacatctcggg
cgcatccgcggtgtcggcggctcgaaattagagcgctatggagacgccgttcttgctgcg
ttacgccagatctag
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