Kozakia baliensis: A0U89_09850
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Entry
A0U89_09850 CDS
T04547
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kba
Kozakia baliensis
Pathway
kba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0U89_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kba03021
]
A0U89_09850
03400 DNA repair and recombination proteins [BR:
kba03400
]
A0U89_09850
Enzymes [BR:
kba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0U89_09850
Transcription machinery [BR:
kba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0U89_09850
DNA repair and recombination proteins [BR:
kba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0U89_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
AOX17390
UniProt:
A0A1D8UUR8
LinkDB
All DBs
Position
complement(2111599..2115849)
Genome browser
AA seq
1416 aa
AA seq
DB search
MNELMKILGQTGQNLSFDQIKIQLASSEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIVCEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIATMIDITLKDLEKVLYFESYIVLESGTSPFKRYSLLSEDQYFDAMDDYADEGLEVG
IGAEAVKKILWKARLRTTEIDRPGLIDRDGRDKDKADGDLLREDLKEATSEAKRKKLVKR
LKLFEAFAESGSRPEWMILDLVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLK
RLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQ
NLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSKLEKYGHATTIKAAKRM
VEKERPEVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNAD
FDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLEVPEY
HTTPDAAEYDAEGRQVKAGPSAYASVGEIELAMTEGSLKLHDKIRLRLETKDENGQSVRQ
TLLTTPGRALIAQILPRHSAIPFSLVNKQLTKKNVSDVIDAVYRHCGQKEAVIFCDRLMG
LGFRHAAKAGISFGKDDMIIPAEKQELVERTQAEIKEFEQQYQDGLITAGERYNKVVDAW
SRCTDEVQAAMMKEISRQVIGQPTNSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEII
EQPIIANFKEGLSVLDYFTSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIIVENDCG
TERGLTVRAVMDGGEVVSSLSERILGRTIAADVLNPANGEVLYPRNTLVEEAEAEVIEKS
GVESVLIRSVLTCDSRVGVCGHCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTF
HIGGAATRGAEQSMVEASRDGVVTIRNRNVVHNSQNIPIVMSRNCEILLTDDKGVERARY
RVPYGARLMVTEGQDVQRGLKMAEWDPYTLPIITEQAGTVEYLDLIDSITLVERMDEVTG
LTSKVVVDYKQGAKGVDLRPRLQLKDASGDVVKLANGNEARYFLSPDSLLSVENGATVHA
GDVLARIPREGSKTRDITGGLPRVAELFEARRPKDHAIIAETEGRIEIGKDYKSKRCIIV
KNDETGDETNYLIPKGKHVSVQEGDFVQKGDPLVDGPRVPHDILKVMGVEALSDYLVNEI
QDVYRLQGVKINDKHIEVIVRQMLQKVEILEPGDTTYLIGETVDRIEFETENAKRLKADE
RPAQGMPVLQGITKASLQTQSFISAASFQETTRVLTEAATAGKVDTLNGLKENVIVGRLI
PAGTGSVMNKLRAMAASQDRQRVSRANPEVTTDAAE
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactcatgaagatcctgggtcagacggggcagaacctgtctttcgaccagatc
aaaatccagctcgcctcgtccgagcagatccgttcctggtcatacggtgagatcaagaag
ccggagacaatcaactaccgcacgttcaagccggaacgcgatggcttgttctgcgcgcgc
atctttggtccgatcaaggactacgaatgcttgtgcggtaagtacaagcgtatgaaattc
cgcggcatcgtgtgcgaaaagtgcggcgtggaagtcacgttggcgaaggtgcgccgtgag
cgcatgggtcatatcgaattggcttcgcctgtcgcgcatatctggttcttgaagtcgttg
ccgagccgtatcgcaacgatgatcgacattacgctgaaagacctcgaaaaggttctgtat
ttcgagagctacatcgttctcgaatccggcacgagccctttcaagcgttatagcttgctg
tcggaagatcagtatttcgatgcgatggacgattatgccgatgaagggcttgaagtcggc
atcggcgcggaagccgtcaagaagatcttgtggaaggcgcgcctgcgtacgaccgagatc
gatcgccctggtctgattgatcgcgatggtcgcgataaggacaaggctgacggcgatctt
ctgcgtgaagatctcaaggaagcgacgtccgaggcgaagcgcaagaagctggttaagcgg
ctgaagctgtttgaggcgtttgcggaaagcggatcgcgtccggaatggatgatcctggat
ctggtgccggtgattccgccggaactgcgcccgttggtgccgcttgacggtggtcgattc
gccacgtccgatctaaacgatctttatcgtcgcgttattaaccgtaacaatcgtttgaag
cgcctgattgagcttcgtgcaccggacattatcgtccgtaacgaaaagcgcatgctccag
gaagctgtggatgcgctgttcgataacggtcgtcgtggtcgcgctattacgggcgccaat
aagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggtcgtttccgtcag
aacctgctcggtaagcgcgtcgactattccggtcgttcggtcatcgtggttggtccggaa
ctgaagctgcaccagtgcggtctgccgaagaaaatggcgctggagctcttcaaaccattc
atctactcgaagcttgagaagtatggccacgccaccactattaaagctgcgaagcgtatg
gtggaaaaagagcgtccggaagtttgggatatccttgaagaggtgatccgcgagcacccg
gtcatgctgaaccgcgcgccgacgcttcaccgtctgggcatccaggcgttcgagccgacg
ttgatcgaagggaaggccatccagcttcatccgctcgtctgcaccgcgttcaacgcggac
ttcgacggtgaccagatggcggttcacgttccgctttcacttgaagcacagctcgaagcg
cgcgtgctgatgatgtccaccaacaacatcctcagcccggcgaacggcaagccgatcatc
gtgccgtcgcaggatatcgtgcttgggctgtattatttgagccttgaagtgccggaatat
catacgacaccggatgcggcggaatatgatgcggaaggccgtcaggtgaaggcgggcccg
tcggcttacgcctcggttggcgagatcgaacttgccatgacggaaggttcgctcaagttg
cacgacaagattcgtctgcgtcttgagactaaggatgaaaacggacagtcggtgcgtcag
acgcttctgacgaccccgggtcgtgcgttaattgcgcagattctgccgcgccattctgcg
attccgttctcgctggtgaacaagcaactcaccaagaagaacgtttctgacgttatcgac
gccgtgtatcgtcattgtggccagaaagaagcagttattttctgcgaccgtttgatgggc
ctcggtttccgtcacgcggcgaaggctggcatctcctttggtaaggacgacatgatcatt
ccggctgaaaagcaggaattggtcgaacgtacgcaagccgagattaaggagttcgaacag
cagtatcaggacggtctgatcacggctggcgagcgttataataaggtggtcgacgcatgg
tcgcgctgcacggatgaagtgcaggccgcgatgatgaaggagatttcccgtcaggtgatc
ggtcagccgacgaactcggtgtggatgatgagccactccggtgcgcgtgggtcgccggca
cagatgaagcagcttgctggtatgcgtggactgatggctaagccgtcgggcgaaattatc
gaacagccgattattgcgaacttcaaagaaggtttgtcggttctcgattacttcacctcg
acccacggcgcgcgtaagggcctcgcggatacggcgttgaagacggcgaactccgggtac
ctgacgcgtcgtctcgttgacgtggcgcaagattgcatcattgtcgaaaacgattgcggt
accgagcgtggtctgaccgttcgtgcggtgatggatggcggtgaggttgtctcttcgttg
tccgagcgtattcttggacgtacgatcgcggcggatgtgcttaatccggctaatggcgaa
gtgctttatccgcgcaatacgctggtcgaagaagccgaagcggaagttatcgagaaatcg
ggcgtggaaagcgttctgatccgttcggtgctgacatgcgatagtcgcgttggtgtttgc
ggtcattgctatggccgtgatctggctcgcggcacgccggtcaacattggtgaagctgtc
ggcgttatcgctgcgcagtccatcggtgagcctggcacgcagttgacgatgcgtaccttc
catattggcggcgcagcgacgcgtggtgctgaacaatcgatggtcgaagcgtctcgtgac
ggcgtggtgacgatccgtaaccgcaacgtggtccataacagccagaacatccccatcgtg
atgtcgcgtaactgcgaaatcctgctgacggatgataagggtgtcgaacgcgcgcgctat
cgcgtgccgtatggtgcgcgtctgatggtgacggaagggcaggacgttcagcgcggcctg
aaaatggccgagtgggatccctacaccctcccgatcattaccgaacaagcaggcacggtg
gaatatctcgacctgatcgattcgatcacgctggtcgaacgtatggacgaagtgaccggt
ctgacttcgaaagtcgtggtggactataagcagggagcaaagggcgtcgatctgcgtccg
cgcttgcaactgaaggacgctagcggcgacgtggtcaagctcgccaacggcaatgaggcg
cgctacttcctctcgcccgattcgctgctttcggtcgagaatggcgcaacggttcacgcg
ggtgacgttctggcgcgtattccgcgcgaaggttcgaaaacgcgtgatattaccggtggt
ctgccgcgcgttgccgaattgttcgaagcccgccgtccgaaggatcatgcgatcatcgcc
gagacggaaggccgaatcgaaatcggtaaggattataagtcgaagcgttgcatcatcgtg
aaaaacgatgagacaggcgatgagacgaattatctgatcccgaagggcaagcacgtttcg
gtgcaggaaggcgacttcgtgcagaagggcgatccgctggtcgatggtccgcgcgtgccg
catgacattctaaaagtcatgggtgtcgaagcgctgtcggattatctcgtgaatgagatt
caggacgtttatcgtctgcagggcgtgaagatcaacgataagcacatcgaggtgatcgtt
cgccagatgctgcagaaagtcgagattctcgagccaggcgatacgacctatcttatcggc
gagacggtggatcgtattgagttcgagacagagaacgccaagaggctcaaggcggatgag
cgtcctgcgcaaggtatgccggtgctccagggcatcaccaaggcatcgctgcagacgcag
tccttcatctccgcagcttccttccaggagaccacacgtgtgctgaccgaagctgccacg
gcgggtaaggtcgatacgctgaatggcctcaaggagaacgtgatcgtcgggcgactgatc
ccggcgggcacaggcagtgtcatgaacaagctgcgtgccatggcggcgagccaggaccgt
cagcgtgtcagccgtgccaatccggaagtgacgacggacgcggcggaataa
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