Ktedonobacteria bacterium brp13: ccbrp13_28640
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Entry
ccbrp13_28640 CDS
T09592
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kbb
Ktedonobacteria bacterium brp13
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kbb03016
]
ccbrp13_28640 (truB)
Enzymes [BR:
kbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ccbrp13_28640 (truB)
Transfer RNA biogenesis [BR:
kbb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ccbrp13_28640 (truB)
Prokaryotic type
ccbrp13_28640 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BCL80399
UniProt:
A0A7I8EMN2
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All DBs
Position
3481443..3482372
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AA seq
309 aa
AA seq
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MDGILNINKAVGVTSHDVVAKIRHMLKQRRVGHTGTLDPLASGVLPICIGQGTRVAEYLS
ESGKAYQAEITFGVVTDTYDTEGEIIRQGDTSGLTLARIQEALLHFQGELQQMPPRYSAI
KVQGQPAYKLARAGVEVTLETRNVTIHALDIRGWSLPRLTLAVSCSKGTYIRSLAYDLGE
YLGCGAHMSGLVRTRSGPFLLEDSLTLEQLALAIEEGQEAVERHLFPADYALQNYPALNL
SVEQTERVLHGNPFRIESDAAKEEASTTGSIETDETPTLGRVYAADGRFLAIATWNAAIQ
QWQPKKVLN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggacggaatactgaatatcaataaggctgtaggcgtaacatcacacgatgtcgtcgcg
aagatacgccatatgcttaagcagcgccgtgtcggccatacggggacgctggaccctctg
gcgagcggcgtcttgccgatctgtatcggacagggtacacgggtcgccgagtatctcagc
gagagcggcaaggcgtatcaagctgagattacctttggcgtcgtgacggatacctacgat
accgaaggcgagatcatacgccagggcgatacaagcggactgacactcgcccgtatccag
gaggcactgttgcacttccagggtgaactacaacagatgccaccgcgctactctgccatc
aaggtgcagggtcaaccggcctataagctggcccgagcaggcgttgaggtcacgttggag
actcgcaacgtcaccattcatgccctggatattcgtggctggtcactaccacgcctgacc
cttgcagtcagttgtagcaaaggcacctatattcgctcgctggcttacgacctgggagaa
tacctgggctgtggcgcgcatatgagtgggcttgtccgtacacgcagcggccccttcttg
ctcgaagatagtctgacgctcgaacaacttgcgctcgccattgaggagggtcaggaagcc
gttgagcgccatctctttccagcagactacgcgctccagaattatcccgcgctcaacctc
agcgtagaacagaccgagcgcgtcctgcacgggaaccccttccgcatcgagtctgacgcg
gcaaaagaagaggccagcacaaccggtagtatcgagacagacgagacccccacgctgggc
cgtgtctatgcagccgatggacgcttcctggcgatcgcgacctggaacgcagcaatacag
caatggcagccaaaaaaggtcttgaactga
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