Ktedonobacteria bacterium brp13: ccbrp13_35630
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Entry
ccbrp13_35630 CDS
T09592
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ccbrp13_35630 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbb03019
]
ccbrp13_35630 (recQ)
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_35630 (recQ)
Enzymes [BR:
kbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ccbrp13_35630 (recQ)
Messenger RNA biogenesis [BR:
kbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ccbrp13_35630 (recQ)
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ccbrp13_35630 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
Helicase_Sgs1
ResIII
T3SS_HrpK1
Motif
Other DBs
NCBI-ProteinID:
BCL81098
UniProt:
A0A7I8ES79
LinkDB
All DBs
Position
complement(4403116..4405353)
Genome browser
AA seq
745 aa
AA seq
DB search
MKEVRVSTVNIDQALKQYFGYDSFRQGQRDIVEHILASEDSLVLMPTGGGKSLTYQLPAL
LQPGLALVISPLIALMRDQVSRLQADGIAATYINSSLSPEECAAREESALRGELKLLYVA
PERLFKKNFLLWLDHLQKKVGISLFAVDEAHCVSEWGHDFRPEYRQLGLLRERYSQVPML
GLTATATERVRQDILEQLRLRQPYVHVASFNRDNLHYEVRKKDKHSYLELLQLLRERAGQ
SVIIYCMSRQGVENLSQELARDGIVNLPYHAGLPMPVRDENQERFIRDDVPVLIATNAFG
MGIAKPDVRAVVHYDLPRNLESYYQESGRAGRDGLPALCILFFNYGDRARAEYMIAQRPD
EQQQAISMQQLRQMIAYSESMQCRRRILLNYFGESVEQENCATCDNCQRPMVYEDRTDDA
ILFMRAIWLTQQRFGMVHIIEVLRGANTQRIRSFNHQHLVVYGAGKALSQVQWRQLGSAL
LQQGYVGETPDSFHTLLLTSQARDITKGGIRFQLASEQAVTQQKTVAEELNLAPLNAELF
HLLRTTRKQLADSLGVPPYVIMNDSSLRMMAQTLPQNEHEFIRIPGVGSKKLEAYYLPFT
AVIAEYQQAHPDIQRTSMIQFNTVRTDEVAARDAGIVERSSSNRTVQAGRRHSVALAAQG
FDLEEIAHACERSSATIVEYLLAAYEHGEDVDLERFIPAGHYEAIVEVFQRVGDRFLKPA
KEELGEDYSYDEIKFARAVMQRAAR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaagttcgtgtatctacggtgaatatcgatcaggcactaaaacagtattttggg
tatgactcgtttcgtcaggggcagcgggatatcgttgagcatattctcgcgagcgaagac
tcgctggtcttaatgccgaccggtggtggtaagtcgttgacgtaccagttgcctgcgcta
ttacagccgggtctggcactggtcatctcgccgctgattgctctgatgcgtgaccaggta
agtcgtttacaggctgatggtattgcggcaacctacatcaatagctcgctgagtcccgag
gaatgtgcagcaagggaggagtcggcgctacgtggcgaacttaaattgctctatgttgct
cctgaacgcctcttcaaaaaaaactttctactctggctcgaccatctgcaaaagaaggtt
ggtatctcgctctttgccgttgacgaggcccattgtgtcagtgaatggggccatgatttc
cgacctgaataccggcagcttggtctgctgcgtgagcgctattcgcaggtaccgatgctt
ggcttgactgccacggcgaccgaacgtgtacgacaagatattctggagcagttacgtctc
cggcagccctacgtgcatgttgcgagctttaatcgtgacaatctacactacgaggtgcgc
aaaaaagataagcattcctatctggaactgctccagcttttacgtgagcgagcaggacag
tctgtcatcatctactgcatgagccggcaaggtgtagagaatcttagccaggagttagcg
cgcgatggtattgtgaatctgccttaccatgccggactcccgatgcctgttcgtgacgag
aatcaggaacgttttattcgcgatgatgtaccggtgctgatcgctacgaacgctttcggt
atgggtatcgccaagccagacgtacgtgctgtcgtgcactatgatctcccgcgtaatcta
gagagctattatcaggagtccgggcgtgcaggacgagatggtctgcccgcactctgtatc
ctctttttcaactatggggatcgtgcacgtgctgaatatatgattgcgcaacgaccggat
gagcagcagcaggcgatctctatgcagcagctacggcagatgatcgcgtatagcgagagc
atgcagtgtcgtcgtcgcatcctcttaaactactttggcgagagcgtcgagcaagagaat
tgtgcgacctgtgacaattgccagcgtccaatggtctatgaggatcgtacggatgacgcg
attctgtttatgcgtgccatctggctgacgcagcaacgttttgggatggttcatattatt
gaggttctgcgtggcgcaaatacacagcgcattcgttcttttaatcatcaacacctggtt
gtgtatggagctggcaaagcgctgagtcaggtgcaatggcgtcaactcgggagtgccttg
ctgcaacagggctacgtaggcgagacccccgatagctttcacacgctgctcctgacttcg
caggcgcgtgatattaccaaaggcggcatccggttccagctagcgtccgagcaggcagtt
acacagcagaagacggttgccgaagagttaaatcttgcgccccttaacgcagaactattc
catctgctgcgtaccacgcgtaagcaattggcggacagccttggtgtgccgccgtatgtc
attatgaacgactcgtcgctgcgtatgatggctcagactctgccgcagaacgagcacgaa
tttatacgtattccgggcgttggcagtaagaagctggaagcgtattatctcccttttacc
gcagtgattgctgaatatcagcaggcgcatcctgatattcagcgtacgtctatgatccag
ttcaataccgtgagaacggatgaggttgctgcgcgcgacgctggtatcgtggagcgttct
agcagtaatcggactgtgcaggcgggacggcgtcattctgtcgcgttagcggcacagggt
tttgatctggaagagatcgcccacgcctgcgagcgttcttctgccaccattgtagagtac
ctgctggcggcatatgagcacggtgaagatgtagacctggagcgttttatcccggcagga
cactatgaagcgattgttgaagtctttcaacgtgtaggagatcgcttcttaaagcccgca
aaagaggaactgggcgaagactacagctatgatgagataaagttcgcacgcgcggtgatg
cagcgtgccgcaaggtga
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integrated database retrieval system
