Ktedonobacteria bacterium brp13: ccbrp13_37980
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Entry
ccbrp13_37980 CDS
T09592
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb02020
Two-component system
kbb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ccbrp13_37980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ccbrp13_37980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbb03021
]
ccbrp13_37980
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
kbb02035
]
ccbrp13_37980
Transcription machinery [BR:
kbb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ccbrp13_37980
Bacterial motility proteins [BR:
kbb02035
]
Flagellar system
Flagellar assembly proteins
Stator
ccbrp13_37980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
DUF3263
MarR_2
PsiA
Motif
Other DBs
NCBI-ProteinID:
BCL81333
LinkDB
All DBs
Position
complement(4703946..4704959)
Genome browser
AA seq
337 aa
AA seq
DB search
MGIEAPTEIETLWLTYVAQRTPELRNKLITMYAPLVRFVVGRLGIPPTGLLDAEDLVSYG
MIGLINAIDRYDPLRGVRFEAFASVRIRGAVIDQLRSLNWLPRSAISRVRQVEGALAVLE
QRLGRPAKEDEVAEEIGVSTERYRQMLLEMNATVLSLDAPLGSLLQDDEVTSLSELLEDQ
SSPGPVEQAEQQELTDTLGGAIDHLPDREKLLLALYYQEELTMKEISKVLSVSESRVCQL
HIQAIMRLRGTLHAYQRDERVEAEAVGASAGRKKHSGAKGHRAQDAGSGGQGQHTSQAEP
VSQATQVNSTDHAYAAHETGNTKVVTRDEARHRRKIS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgaggcaccgaccgagatagagacactctggctgacctatgttgcgcagagg
acaccagagttgcgcaataaattaattacaatgtatgctccacttgtgcgttttgtcgtg
ggacgcctgggaattccgccgacaggattattggatgccgaagatcttgtcagctatggt
atgattggcctgattaatgcaattgatcgttatgatccgctgcggggagtgcgttttgaa
gcctttgcttcagtacgtatccgtggcgcagtcatcgaccagctgcgttcactgaactgg
ttgccgcgctcagcgatctcgcgagtgcggcaggttgaaggtgcattggcggtattagag
cagcgtctggggcgaccggcgaaggaggatgaggtagcggaagagattggggtgtcgaca
gaacgctatcgtcagatgcttctggaaatgaacgctaccgtgctctctcttgatgctccg
cttggctctctcttgcaggatgacgaagtaacatcgctttctgaactcttagaggatcaa
agttcccccgggcccgttgaacaggccgaacagcaagaactaacggatacgctgggggga
gcgatcgatcacctaccggaccgagagaagttactgctcgccctttactaccaagaagaa
ctaacgatgaaggagattagcaaagttttaagtgtctctgagtcgcgtgtctgtcaatta
cacattcaagcgattatgcgcctgcgcgggacgttacatgcgtatcagcgtgatgaacgt
gtcgaagcggaggcggtcggagccagcgcaggacgcaaaaaacattcaggtgcgaagggt
caccgtgcccaggatgctgggagtggaggccagggccaacatacgagccaggctgagccg
gtcagtcaagccacgcaggtaaactcgacggaccatgcgtatgctgctcatgagacaggt
aatacgaaggtcgttacgagagatgaggctcgtcatcggcgtaagatatcataa
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