Ktedonobacteria bacterium brp13: ccbrp13_38060
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Entry
ccbrp13_38060 CDS
T09592
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ccbrp13_38060 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_38060 (uvrA)
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ccbrp13_38060 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ccbrp13_38060 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_29
RsgA_GTPase
AAA_25
nSTAND3
nSTAND1
ATPase_2
AAA_22
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_23
NB-ARC
Viral_helicase1
Zn_Tnp_IS91
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
BCL81341
LinkDB
All DBs
Position
4714157..4717402
Genome browser
AA seq
1081 aa
AA seq
DB search
MPQDKIIVRGAREHNLKNIDVTIPRDKLVVITGLSGSGKSSLAFDTIFAEGQRRYVESLS
AYARQFLDKMDKPDVEHIDGLSPAISIDQKGATHNPRSTVGTVTEIYDYLRLLYARIGHQ
HCPQCGREVSQQTLQQIVDAVLSLPDSTRILLLAPLVQGRKGEYKNVFEEMRRAGYVRVR
VDGKILDLSDEIDLDKQKKHTIEVVVDRLVIRKQKKQALAELDGHTEQPGQDGADTSNGT
NHHAQNGLQRVAEPAALYEVNAAKEEGRDEDGIAEPDIPAILHEDVDPSFRQRISDSLET
TLKLGSGVVLVAIVDGEEILFSEKAACVYCNISLPEIAPRTFSFNSPHGACPTCTGLGTQ
QEIDPELIVTNADLSLLQGAIAPWSKMANSSQWHAATLEALAQRYAFDLNTPWKNLSADI
RQKLLYGIEEPLTIRYTPQHGNLRTYNTHFEGVIPNLTRRYQQTESEWAREDIENYMSAR
VCPDCHGARLKPEALAVTVGGRNVVQVTRLSIARAQAYFQEIVNGEATVTPPLTHLPAVG
TARKSNSKKAEKNGSLLGDPLTPIPLEGPLVKSRLSERERFIARQILKEIHARLQFLLDV
GLEYLTLDRGAATLSGGEAQRIRLATQIGSGLMGVLYILDEPSIGLHQRDNERLIQTLIR
LRNLGNTLLVVEHDEDTMRAADYIIDVGPGAGEHGGRIVATGTYDEIVANVDSLTGDYLA
HRKQIEIPAERRPGNGNVVTIRGASENNLKNIDAEIPLGKFVTITGVSGSGKSTLITDIL
YRKLSQHFFRAHDRPGQHETIEGLEHLDKVIDIDQSPIGRTPRSNPATYTNAFTAIREIY
AQVPESRLRGYKSGRFSFNVKGGRCEACKGEGIVKIEMNFLPDVYVPCEICQGKRYNREA
LEIHYKGKSIADVLDMTIEEAQEFFANIPSIYNKMKTLYDVGLGYMKLGQPATTLSGGEA
QRVKLATELSRRATGRTMYILDEPTTGLHFADVARLLDVLQRLVDAGNTIVVIEHNLDVI
KSSDWLIDLGPEGGDAGGQIIAQGTPEDVAQDKHSYTGHFLKRMLDEEVANKDKRILSVA
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgccccaggataaaattatagtacgtggtgctcgtgagcacaatttaaagaatattgac
gtgactatcccacgtgataagctggtagtcattactggtctctcaggttctggcaagagt
agcctggcctttgataccatcttcgcagagggacagcgtcgctatgtcgagtcgctctcc
gcctacgcacgtcaatttctcgacaaaatggataagcccgacgtagagcatatcgatggt
ctctccccggctatctctattgatcagaagggggcaacgcataatccccgttcaaccgtg
ggcaccgtcactgagatctatgattatctacgtctgctctatgcgcgtatcggtcatcag
cattgccctcaatgcggacgcgaagtgagccagcagacgctacaacagattgtggatgct
gtcctcagcctgccagatagcacgcgtattttgttgctggctcctctggtgcagggtcgc
aaaggtgaatataagaatgtcttcgaggagatgcgccgcgccggctatgtgcgcgtccgt
gtcgatgggaagattcttgacctgagcgacgagatcgatcttgacaagcagaagaaacat
actatcgaagtcgttgtcgatcgtctggtcatccgcaagcagaagaaacaagcattggcg
gaactggatggtcacactgagcaacctggtcaggacggcgctgatactagtaatggcacc
aaccaccatgctcaaaatggtctgcaacgcgttgctgagccagcggcgctctacgaggta
aacgcagccaaagaggaaggtcgtgacgaggatggtatcgctgaaccagatatccccgcg
attctgcatgaggatgtcgatccctccttccgtcagcgcatctcagactccctggagaca
accctgaaactgggtagcggagtcgtgctggtcgcgattgtggatggcgaggagatcctc
ttctctgagaaggctgcctgcgtctactgcaatattagtttgccagagatcgcaccccgt
acgtttagcttcaatagtccacacggcgcttgcccgacctgtactggtctgggtacgcag
caagagatcgatcctgaactcatcgtcaccaacgcggatctgagcctcttacagggagcg
attgcgccctggagtaagatggctaatagcagtcagtggcatgcggcaacgctagaggcg
ctggcacagcgctatgcgttcgatctcaacactccctggaaaaatctctctgccgatatc
cgtcagaagctgctctatggtatcgaggagccgctgaccattcgctatacgccacagcac
ggcaatctgcgtacctataatacgcactttgaaggcgtcattcctaatctgactagacgc
taccagcagaccgagagcgagtgggcgcgggaagacattgagaactatatgtcggcgcgc
gtctgccccgattgccacggtgcccgcctgaagccagaggctctggcggtgactgtcggt
ggtcgcaatgtcgtacaggtgacacgtctctcgatcgcacgcgcacaggcctacttccag
gagatcgtcaacggcgaggcgacggtaacgccgccactgacccacctgccagcagtcggt
actgcgcgcaagagcaatagtaagaaggccgagaagaatggttcgctactcggtgatcca
ctgaccccgatcccgctggagggtccactggtcaagagtagattgagtgaacgcgaacgt
tttatcgctcgccagatcctcaaagagatccatgcacgtctacaattcttgctggatgtc
ggtctggagtatctgacgttggatcgtggagctgctacgctctccggtggtgaggcgcag
cgtattcgactcgcaacgcagatcggttccggtctgatgggtgtgctctacattctggat
gagcccagcattggactgcatcaacgcgataacgaacgcctgatccaaaccctgatccga
ctacgcaacctggggaataccctgctagtcgttgagcacgatgaagatacgatgcgcgca
gcagactacatcattgatgtcggtcccggtgccggtgagcacggcggtcggatcgtcgcg
accggtacctatgacgagatcgttgccaacgtagattctctgaccggcgactatctcgca
catcgcaaacagatcgagatcccggctgaacgccgacctggcaatggtaacgttgtcacg
atccgtggtgccagcgagaacaacctgaaaaacatcgatgccgagattccgctgggcaag
tttgtcaccattaccggcgtctctggctccggcaaaagtaccttgatcaccgatatcctg
tatcgcaagctctcgcagcacttcttccgggcacacgatcgaccaggtcagcacgagacc
atcgagggacttgaacacctggacaaggtcatcgatatcgatcagtcgccgattggacgt
acaccacgctcgaatccagcgacctataccaacgcattcacagccattcgcgagatctac
gcccaggtcccagagtcacgcctgcgtggctacaagtctggacgtttctcatttaacgtc
aagggtggtcgctgcgaagcctgtaagggtgaaggcattgtcaagatcgaaatgaacttc
ctaccggacgtctacgtaccctgcgagatctgtcagggcaagcgttacaatcgcgaggct
ctggagatccactacaaaggcaagagtatcgccgacgtactggatatgaccatcgaagag
gcccaggagttcttcgccaatatcccatcgatctacaacaaaatgaagacactctacgat
gtcggcctgggatacatgaagctcggtcaacctgcgacaacgctctctggtggcgaggcc
caacgtgtgaagctagccacagagctatcgcgccgcgcgactggacgtacgatgtacatc
ctggacgaaccaacgaccggactacacttcgccgacgttgctcgcctgctagacgtactc
cagagactggtcgatgccggcaatacgatcgtcgtcatcgaacataacctggatgttatt
aagagctccgactggctgatcgatcttggacccgaaggcggagacgccggtggacagatc
atcgcccagggcacacctgaagacgtcgcacaggacaagcactcttacaccggtcacttc
ttaaagcgtatgcttgacgaagaggtcgccaacaaagataaacgtattctgagtgtcgcc
cagtaa
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