Ktedonobacteria bacterium brp13: ccbrp13_43810
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Entry
ccbrp13_43810 CDS
T09592
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ccbrp13_43810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbb03019
]
ccbrp13_43810
03016 Transfer RNA biogenesis [BR:
kbb03016
]
ccbrp13_43810
Enzymes [BR:
kbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ccbrp13_43810
Messenger RNA biogenesis [BR:
kbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ccbrp13_43810
Transfer RNA biogenesis [BR:
kbb03016
]
Prokaryotic type
tRNA degradation factors
ccbrp13_43810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KhpA-B_KH
CsrA
Motif
Other DBs
NCBI-ProteinID:
BCL81916
UniProt:
A0A7I8ES09
LinkDB
All DBs
Position
complement(5407811..5410267)
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AA seq
818 aa
AA seq
DB search
MIHRQEAVIGGRVLSIEAGRVAEQASGAVIVRYGDTVILATVVGSNEPREGIDFFPLTVD
VEERMYAAGKIPGGFIKREGRATEHAILTCRLVDRPLRPLFPKGYRNDVQVVITVLSSDQ
ENDYDILGIVGASAALSISDIPFAGPVGAVRVGYVDDQLVINPLESQTGQSRLDLAIAGT
SDAVMMVEAGAKELPEALMLESVRFGHEALQDIIKMQERLVQSVNRAKREFVPAQADEEL
HAKVRAFVFPRFDAAVTNSDKASRAEALSQVQEALVAQFSEEYPERLKEIIGFYEKELKS
YVRSNILDNGIRVDGRDLKTIRPISCEVGLLPRAHGSALFTRGQTQVLSTVTLGSPGDEQ
ILDGLGANENKRFMHHYNFPPYSTGESRPMRGPGRREIGHGALAERAVSAVLPSQGEFPY
TIRAVSDILSSNGSTSMGSVCGTTLALMDAGVPIHAPVAGVAMGLITGEGERAGKWAVMS
DIQGIEDALGDMDFKVAGTADGVTALQMDIKVKGITYEIMEQALEQAHEGRMFIMEKMLD
AIDAPREELSGFAPRIQTLKINPDKIGAVIGPGGKTIRKIQDDSGAKLDIEDDGSVNISA
TSGESMQRAMDAVRALTEEVEVGHIYTGTVRRIVEFGCFVEILPGKEGLVRTSQLADYQV
TRPEDVVSIGDEITVMVIEVDGQGRVNLSRRAALSGEMPSPAELESERNSRGGRGGPGRG
PGGYGDRDRGGMGGGRDRGGYGGDRGGYGDRGGMGGGRDRGGYGGDRDRGGSYGGGDRGG
SSFGQRRPMTGGPGGPGGRPNNAPRRDGNYGQRPDRRW
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgattcaccgtcaagaagctgttatcggcggtcgagtattgagtattgaggctggccga
gtagcagaacaggctagtggcgcagtgattgtgcgttatggcgacactgttatccttgcc
actgttgttggaagtaatgagcctcgtgagggtatcgatttttttccccttaccgttgat
gttgaagagcgtatgtatgccgctggtaagattcctggcggttttatcaaacgcgaaggt
cgcgctacagagcatgcgatccttacctgccgtcttgttgatcgtcctttacgccctctc
ttccccaaaggttaccgcaacgacgttcaggtcgttatcactgtcctctcttctgatcag
gaaaatgactatgatatcctcggtatcgttggtgcgtcagctgcgttgagcatctctgac
attcccttcgctggccctgtcggtgctgtacgcgttggctatgttgatgatcaactggtc
attaatccacttgagtctcagactggacagagccgcttggacctggcgatcgctggtact
tccgatgctgtgatgatggttgaggccggtgcgaaagagctgccagaggctctgatgctg
gagtccgtccgctttggtcatgaggccctgcaagatattattaagatgcaggagcggctg
gttcagtctgtgaaccgtgccaagcgtgagttcgttccggctcaggccgatgaggaactg
catgcgaaggtacgtgcgttcgtgttccctcgctttgatgcggctgtcacgaacagcgat
aaggcgtcgcgtgctgaggctctaagtcaggtgcaagaggctctggttgcgcagttcagt
gaggaatatcctgagcgcttgaaagagattatcggcttctatgagaaagaactgaagtcg
tatgtgcgcagcaatatccttgacaatggtatacgtgtcgatggtcgtgatctgaagacc
attcgccctatcagttgtgaggttggtctgttgccgcgtgcacatggttctgctctcttt
acacgaggtcagacgcaggtattgagtactgtgacgctgggttctcccggtgatgagcag
attctggatggcctgggtgctaacgagaacaagcgttttatgcaccactataacttccct
ccttattcaaccggtgagagtcgcccgatgcgtggtccaggccgtcgtgagatcggtcat
ggtgctctggctgagcgtgcggtctccgcggttcttccttcacagggcgagttcccttat
accattcgtgcggtctctgatattctgtcgtccaatggttcgacctcgatgggttccgtc
tgtggtacgacgctggctctgatggatgctggtgtgccgatccatgctcctgttgctggt
gtggcgatggggctgatcactggtgagggtgagcgtgcaggcaagtgggctgtgatgtct
gatattcagggtatcgaagatgcgctgggtgatatggacttcaaggtcgctggtaccgct
gatggcgtgactgcgctccagatggatattaaggtgaagggcatcacatacgagatcatg
gagcaggctcttgagcaggctcatgagggtcgtatgttcattatggagaagatgctggat
gccattgatgcgcctcgtgaggagctctctggttttgccccccgtatccagacattgaaa
attaatccagacaagatcggtgctgtcatcggcccaggcggtaagacgatccgtaagatc
caggatgatagtggtgccaagctcgatatcgaggatgatggctcagtgaatatctcagct
acttctggcgagtcgatgcaacgtgcgatggatgctgtgcgtgctctgaccgaagaggtc
gaggttggtcacatctataccggtacggtacgccgtattgttgagtttggttgttttgtt
gagatcctgccaggtaaagagggtcttgtgcgtacgtcacaactggctgactaccaggtt
acgcgtcctgaggatgttgtctcaattggagacgagatcactgtgatggtgatcgaggtt
gatggtcagggacgtgtcaatctctcccgccgtgctgcgttgagtggtgagatgccttcg
ccggcagagttggagagcgagcgtaacagtcgtggtggtcgtggtggtcccggtcgtgga
cccggcggctatggtgatcgtgaccgtggaggtatgggtggtggtcgagatcgtggcggc
tacggcggcgaccgtggtggctatggcgaccgcggtggtatgggcggtggtcgagatcgt
ggcggctacggcggcgaccgagatcgcggcggcagctatggtggtggtgaccgcggcggt
agcagtttcggtcagcgccgtcccatgactggcggccccggtggccctggtggacgcccg
aataatgctcctcgtcgtgatgggaattatgggcagcgtcctgaccgtcgctggtaa
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