Ktedonobacteria bacterium brp13: ccbrp13_44970
Help
Entry
ccbrp13_44970 CDS
T09592
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03030
DNA replication
kbb03430
Mismatch repair
kbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ccbrp13_44970
03430 Mismatch repair
ccbrp13_44970
03440 Homologous recombination
ccbrp13_44970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbb03032
]
ccbrp13_44970
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_44970
Enzymes [BR:
kbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ccbrp13_44970
DNA replication proteins [BR:
kbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ccbrp13_44970
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ccbrp13_44970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCL82032
UniProt:
A0A7I8EV09
LinkDB
All DBs
Position
5548095..5551613
Genome browser
AA seq
1172 aa
AA seq
DB search
MGADFAHLHVHTEYSLLDGLSRIKKLVKQTKALGMNHLAITDHGTMYGAIEFYKACKAEG
VNPIIGVEAYLTENIHDRTKPRHDDYTHLLLMAKNNTGYHNLLKLTSIANTQGVRANKPR
IDKDLLAKYGEGLIATSSCLGGEIPQLLAKDQYDEARKIARWYQDVLGPENYYLEIQDHH
GCEDDGKPSPQVDVNQQLYRMHKDMGIPMIATNDLHYVHDTDAKVHEILLCVQTASQLAG
KHFHFDSQEYFLRSPEQMLQLFPDLPDALTNTVRLAEQCSIDPLAYKATLPAFAIPPEYA
TQRDYLYDLCIKGMHERFGEITEPMYRQLDYEFSIIEQKGFVAYFLIVGDFVAWSRNNGI
RCSARGSAAGSLVAYSLGITNVDPLRYHLLFERFLNPERDDMPDVDMDFSDNRREDVINY
VAQKYGDDCVAQMVTFNTMAAKNSVKDVSRVLGQQEVGERISRLIPSGPKITLQGSLDEV
KDLNDLYKSNSIAREILDQALQLEGCVRSTGTHAAGVVIGNEPLENFVPMRSKDHKDPSA
GRETQYEHDHLEELGLIKFDFLGLSNLTILDNTVKFIQDGRGELINLEKVPLDPVEGMDE
QNAMRQKAFELLALGETTGVFQLEGAKMREYIKQLKPTSIEDVTAMVALYRPGPMDSIPD
FVDSKHGRKKVTYLDPRLEEWLAESYGVIVYQDQVLLIAVNLAGFSWGKVNKFRKALSKK
KMDEVESYRADFIKGCVSNGVAQEVAEQLFTLVLPFGGYGFNKAHAASYAVVAFYTAYLK
ANYTAEFMAATMTTEAADAKKISAAISECKRMGVEILGPDVSYSDMGFTVEDDCVRFGLL
AIKGVGEGPIGEIVRARREGGPFKSLADFCTRVDPKFAGKGVIETLIKAGAMDTLADGKR
HQLLASVERAMQFGKSERAAKAQGMMSLFGDLEEIGNAFEFQMNENADEISRKQLLSWEK
ELIGVYISNHPLAYLSDLFKDVVTHTVIEVTEELDKQKVVLGGTIKEVRKITTKKGDTMC
VAQLEDMYGTIAVTVFPRTYEETADKWVEDSVVIVRGEVQLRRDEPNILCNSVQPLNAVE
EEMNRKRYQLWLNIQLTGNDEVAVSNDIMKIQDVQRHINAQPGRDHYEILVSNGEWQVRL
TPADNSMQYSPELHSRLETLLGTGTVEAMVVG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggacttcgcgcatctacatgttcacacagaatattcgttactagacggcctt
agccgcatcaagaagcttgtgaaacagacgaaggcgctaggcatgaaccacctggcaatc
actgatcacggcacgatgtatggggccatcgaattctacaaggcctgtaaggccgagggg
gtcaacccgatcatcggcgtagaggcatacctgaccgaaaatatccacgaccgcaccaaa
ccccggcatgatgactatacgcacctcctactgatggcaaagaataataccggctatcac
aatctgctcaaactgacgagcatcgcaaatacacagggtgtgcgcgccaataagccgcgt
attgataaagatctgctcgcgaagtacggcgaagggctgattgcgacctcgtcttgcctg
ggcggcgagatcccacagttactagcaaaggatcagtatgatgaggcacgcaagatcgca
cgctggtatcaagacgtcctgggtccagagaactactacctggagatccaggatcatcat
ggctgtgaagacgacggcaaaccttcaccccaggtcgacgtcaaccagcagctttatcgg
atgcacaaggatatgggcatcccgatgattgcaaccaacgatctacactatgtgcacgat
accgatgcaaaggtacatgagatcctgctctgtgtacagaccgccagtcaactggcaggc
aaacacttccactttgatagccaggaatattttctgcgcagtcccgaacagatgctacaa
ctcttccctgatctaccggatgcgttgaccaatacggtccggcttgcggagcagtgcagc
atcgatccactggcctataaagcgacacttccggcgttcgccatcccgcctgaatatgca
acacaacgcgattacctttatgacctgtgtatcaaagggatgcatgagcgcttcggcgag
atcaccgagccaatgtaccgccagctcgactacgaattcagtatcatcgagcagaagggt
tttgttgcctacttcttgatcgtcggtgactttgtcgcgtggtcgcgtaataacggcatc
cgttgttccgcgcgtggctcggcggctggtagtctggtcgcctactcactcggcatcacc
aacgtcgatcccttacgctatcacttgctctttgaacgcttcctgaatccagagcgcgac
gatatgcctgatgttgacatggatttttccgataaccgtcgcgaagatgtcatcaactac
gtcgcgcagaagtacggtgatgactgcgtcgcacagatggtaaccttcaatacgatggcc
gccaaaaactccgtgaaggacgtctcccgtgtactgggacagcaagaggtcggtgaacgt
atcagccgcctgatcccttcgggtccaaaaattacgctccagggttcgctcgacgaagtc
aaagatctgaatgacctctacaaaagtaactcgattgcacgcgagatcctggatcaggcg
ctgcaactcgaaggctgcgtccgctcgaccggcacacacgctgccggtgtcgtcattggc
aacgaaccactggaaaactttgtaccgatgcgctccaaggaccacaaagatcccagcgcg
ggccgtgagacgcagtacgaacatgaccatctcgaagagcttggtctgatcaagttcgac
ttcctgggcctctcgaacctgaccatccttgataataccgtcaagtttattcaagatggc
cgtggcgagctgatcaatctagagaaggttccgcttgatccggtcgaggggatggatgag
cagaacgcgatgcgccagaaggcctttgaactgctggccctgggcgaaaccaccggtgtc
ttccagttggaaggtgccaagatgcgcgagtacatcaagcagttgaagccgactagtatc
gaggatgtgaccgcaatggtcgccctctaccgaccgggtccgatggatagtattccagac
tttgtcgactccaaacatggacgtaagaaggttacctatctggatccacgtttggaagaa
tggctggctgaatcctacggcgttatcgtctatcaggaccaggtgctgctgatcgctgta
aacctggccggcttctcctggggcaaggtaaataagttccgtaaagccctcagtaagaag
aagatggatgaggtagaaagctaccgcgccgacttcatcaaaggctgcgtcagcaacggc
gtcgcgcaagaagttgcggaacagctctttacgctggtcttaccattcggcggttatggt
ttcaataaggcccacgccgccagttatgccgtcgtcgccttctataccgcctatctgaaa
gccaactatacggccgagtttatggccgcgacgatgacaaccgaggcagcagacgccaag
aagatctcggcggccatctcggaatgtaagcgcatgggtgtcgaaatattgggtcctgat
gtcagctatagcgatatgggctttaccgtcgaagacgattgcgtgcgctttggattgcta
gcgatcaagggcgttggtgaggggccgatcggtgagatcgtccgtgctcgtcgggagggt
ggacccttcaaatcgctggccgacttctgtacgcgcgtcgatcccaaatttgccgggaag
ggcgtcatcgagaccctgatcaaggctggcgcaatggatacgctggcggatggcaaacgt
caccagttactcgcctctgttgagcgcgctatgcagtttggtaagagcgaacgcgctgcg
aaagcacagggtatgatgagcctcttcggtgatctggaagagatcgggaacgccttcgag
ttccagatgaacgagaatgccgatgagatctcgcgcaagcagttgctcagctgggagaaa
gaactgatcggcgtctatatctccaatcatccactggcttacctgtctgatctctttaaa
gatgtcgtcacacataccgttatagaggtcacagaagagctcgataaacaaaaggtcgtc
ctgggtggaacaatcaaagaggtgcgtaaaatcacgacaaaaaaaggcgacacgatgtgc
gtcgcccagttagaagatatgtatggcactatcgccgtcaccgtcttcccacgcacctac
gaagagacagcggataaatgggtcgaagattcggtcgttatcgtccgtggcgaagtccag
ctacgacgcgacgaacccaatatcctctgtaacagtgtgcagccactgaatgcggtcgaa
gaagagatgaatcggaaacgctatcaactctggctgaatatccagcttaccggcaacgac
gaggtcgccgtctcgaacgacatcatgaagatccaggatgtacagcgccacattaatgcg
cagcctggacgcgatcactatgagatcctggtctccaacggagaatggcaggtccgcctg
acaccagcggataacagcatgcagtatagcccggagctccactccagactagaaacgttg
ctgggaaccggaaccgtcgaagccatggtcgtcggctaa
DBGET
integrated database retrieval system
