Ktedonobacteria bacterium brp13: ccbrp13_45590
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Entry
ccbrp13_45590 CDS
T09592
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ccbrp13_45590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbb03021
]
ccbrp13_45590
Transcription machinery [BR:
kbb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ccbrp13_45590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Cas9_a
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BCL82094
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All DBs
Position
5634654..5635988
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AA seq
444 aa
AA seq
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MVNRDQEVMDRIQNKRGDVNTVSKASAVGAASAVSTGTLHDVFEHFTVDKNDPIIHTTDD
VFAIDIVGHHAHVPTEIPKESVGESEEFDLFKLQDEEPMEALDSTKEPPADWEPGPEEVA
EVDVEILADPKWDDINDGLGIVVADLEGSLDDPVRMYLREIGRVPLLNAEEEVRLAQLME
RGKQERLRAEHLRVSANRRIVVDGEEAQRRLTEANLRLVVSVAKKYIGRGMNLLDLIQEG
NIGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRLIRISR
RLLQDLGREPTSEEIAEQMEISAEKVREIIKVSQEPVSLETPIGEEDDSHLGDFLEDQTA
LAPAEAASHQLLKEQVEDVLDSLTERERKVLQLRFGLDDGRSRTLEEVGKEFHVTRERIR
QIEAKALRKLRHPSRSRKLKDYLD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatcgggaccaagaagtaatggatcgaatacaaaataaacgtggtgatgtgaat
acagtgagtaaagcgagtgcagttggcgcagcaagtgctgtcagtacagggacactccat
gatgtgtttgagcactttactgtagataaaaacgatcccattatacatactactgatgat
gtctttgctattgatatcgtcggtcatcatgctcacgtcccaactgagatcccgaaggag
tcggttggtgaaagtgaggaatttgacctgtttaagctacaggacgaagagcctatggaa
gccctggactcaaccaaagagccgccagcggattgggagcccggtcccgaagaagttgct
gaagtggatgtagaaattctggcagatccgaaatgggatgatatcaacgatggacttggc
atagttgttgctgacctcgaaggtagcctggatgatcccgtccgcatgtatctgcgtgaa
atcggtcgtgtcccgttgttgaacgctgaagaagaggttcgcctggcacaattgatggag
cgcggcaaacaggaacggttacgggctgagcatctgcgagtatccgcgaatcgtagaatt
gttgtcgatggtgaggaggcgcaacgccgtctgaccgaagccaatctgcgtctcgttgta
agtgtagcgaagaagtatattggtcgtggcatgaacctgctggacttgatccaggagggc
aatattggcttgattcgtgcggttgagaagtttgattataccaagggctataagtttagc
acgtatgccacctggtggattcgccaggcgattactcgtgctattgctgaccaggctcgt
accattcgtatcccggtccacatggttgagacaatcaatcgtttgattcgcatcagtcgc
cggcttctgcaagatctggggcgagaaccaacctctgaagagatagccgagcagatggag
atcagcgccgagaaagtacgtgagatcatcaaggtgagccaggagcccgtgagcctggag
acaccgatcggtgaagaggatgacagccacctgggcgacttcctggaagaccagacagct
ctggcaccagccgaagccgcgagtcatcaattactcaaagagcaggtcgaagatgtactg
gatagcctgactgagcgcgaacgtaaagtattgcaattacgctttggtcttgacgacggt
cgtagccgcacgttggaagaggtcggtaaagagtttcatgtgacgcgtgagcgtatccgc
cagattgaagcaaaggctctgcgtaaattacgccatccgagccgcagccgtaagctgaaa
gattacctggattaa
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