Ktedonobacteria bacterium brp13: ccbrp13_49160
Help
Entry
ccbrp13_49160 CDS
T09592
Symbol
rpoC_3
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ccbrp13_49160 (rpoC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbb03021
]
ccbrp13_49160 (rpoC_3)
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_49160 (rpoC_3)
Enzymes [BR:
kbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ccbrp13_49160 (rpoC_3)
Transcription machinery [BR:
kbb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ccbrp13_49160 (rpoC_3)
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ccbrp13_49160 (rpoC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
BCL82451
UniProt:
A0A7I8EVF7
LinkDB
All DBs
Position
6058149..6062486
Genome browser
AA seq
1445 aa
AA seq
DB search
MLEVNDFNAIRISLASPEQIRGWSYGEVTKPETINYRTLKPEKDGLFCERIFGPTKDWEC
YCGKYKRVRFKGIVCDKCGVEVARSKVRRERMGHIELASPVSHIWYFKGTPSRIGLLLDL
SPRNLERILYFALYVVTNIDEEARQRELMRLDEELVGLEQNLDEKIVERITSLRAQRESA
LQENNEHYGVVDRQEVEARREHDLEEARKAESETLELIRSKIGEAVEDPIYFTPTDQTIV
KEGETVSSRHLEVLERVADTARNAIAENARREAEGNASEGRREADRLNLDFQSQIDNAQS
QMERERNESRQRIEQLRRDLEGLKKMDLLQENRYRELKDNFLDVFSAGMGAEAVRELIAG
IDLDKLAGDLRHEINSTVGQRRKKATKRLKVTEAFRKSHTSPEWMILTVLPVLPPDLRPM
VQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPEIIIRNEKRMLQEACDALIDNGRR
GRAVAGSGNHKLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLNQCGLPKRM
ALELFKPFVMRKLVEQNFAHNIKSAKRFVERIKPEVWDVLEEVIKDHPVLLNRAPTLHRL
GIQAFEAVLVEGSAIQLHPLVCSAFNADFDGDQMAVHVPLSDKAQDEARQFMMSTRNLLS
PAHGEPSIGASQDMVLGCYYLTQERPNKKGEGRVFTDAGEALLAYDNGVIDLQAPIRVRL
GEIDIYDQAPPEKVTMHSSNKLVKTTVGRIIFNEVLPERIRFKNYAMKKENLKQVIGECF
KEYGRVKTTDLADDIKRLGFTFATKAGTTVAISDVKVPEGKAAELIKADAKIAELQEQFH
DGLITENERYLQTISTWNEATDNVQKMVRSVLDPFGSIYTIAESGATKAKFQQIRQLSGM
RGLMASPSGRIIDIPIRGNFREGLNVSEYFISTHGARKGLADTALRTAESGYLTRRLIDV
AQDAIVTEEDCGTTDGIMITDFDSKDMALENSRGRLLGRVLAEPIPELPHLDVNEELSDD
DVDEIVAANIKAVRVRSVLNCLARRGICRKCYGRDLAANALARIGAAVGIIAAQSIGEPG
TQLTMRTFHTGGIAGAQGDITQGLPRVEELFEARVPKDKAEISEIDGIVEIIKEEGSNAR
TIRIVSTNVFFDEYLKPKGTEMKVVVNEHDHVQKDQIIALISDERSSEPTPIMARTDGEI
IFNEDESLSIRFEEREERSYAVPVSRNIVVTEGQKIQAGTPITSGQRDPQDVLRIQGREA
VQLYLTKEVQRVYRNTGVYIHDKHIEVIVRQMLRRVKVDDSGDTEMLPNDLVDRFLYADA
NAHVLAEGGEPATASTVLLGVTKASLNTDSFLAAASFQETTRVLTEAAIEAQTDHLVGLK
ENVIIGKLIPAGSGIAQRRRDQLARQQAAAARAAAAAPVVAGVLGGMPVGASAPLGLTLD
SDGNE
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagtaaatgattttaacgcaatccgtatcagccttgccagccccgagcagatt
cgtggttggagttatggcgaggtcacgaaaccggagacaatcaactaccgtacactgaag
cctgaaaaagatggtctattctgtgagcgtatctttggaccgacaaaggactgggagtgc
tactgtggtaagtacaaaagagtgcgcttcaaaggtattgtctgcgacaaatgtggcgtt
gaagtagcgcgttcaaaggttcgccgtgagcgtatgggccatattgaactggcatctcct
gtcagtcatatctggtacttcaaaggcacaccgagtcgtatcggtctgttgcttgatcta
tcgccacgtaacctggagcgcatcctctacttcgccctctatgtcgtcaccaatatcgac
gaagaggcccgccagcgagagctgatgcggctggacgaagagctggtcggtctggagcag
aaccttgacgagaagatcgttgagcgtatcaccagcctgcgagctcagcgtgagagtgca
ttgcaggagaacaacgagcactacggcgttgtggaccgccaggaagtcgaagctcgtcgt
gagcacgaccttgaagaggcccgcaaagctgagagcgagacccttgaactgatccgcagt
aagattggtgaagcagtagaagatccaatctacttcacaccgaccgatcagactatcgtc
aaagaaggtgagaccgtctcatcgcgccacctggaagtgttggagcgtgtcgccgataca
gcacgtaacgccattgcagagaacgctcgccgtgaggcagagggcaacgcatctgaaggc
cgtcgtgaagccgatcgcctgaacctggacttccagagtcagatcgacaatgcccagagc
cagatggagcgtgagcgcaacgagagccgacagcgcatcgaacagctgcgccgcgatctt
gaaggcctcaagaagatggacctgctgcaagagaatcgctatcgcgagttgaaagataac
ttcctcgacgtctttagcgccggcatgggagcagaggccgttcgcgaactcatcgcaggt
atcgacctggataagttagcgggagacctgcgtcacgagatcaactcaacggttggacag
cgccgcaagaaagcgaccaagcgtctgaaagtcaccgaggcattccgcaaatcgcacaca
tcgcctgagtggatgatcctcaccgtcttaccagtgctgccgccagacctgcgtccgatg
gttcagttggatggtggacgtttcgccacctccgatcttaacgatctttatcgtcgtgtc
atcaaccgtaacaaccgcctcaagcgtctgttagagttgggcgcgccagagatcatcatc
cgtaacgagaagcgcatgctgcaagaggcctgtgatgcgctgatcgacaacggacgtcgt
ggacgtgccgtcgccggttccggtaaccacaaactcaagagcctgtcagacatgctcaaa
ggtaagcagggccgtttccgtcagaacttgcttggtaagcgtgttgactactccggtcgt
tcagtcatcgtcgttggacctgaactgaaattgaaccagtgtggtctgccaaaacgtatg
gccctggagctgttcaagccattcgtcatgcgtaaacttgttgagcagaactttgctcac
aacatcaagagtgccaaacgttttgtcgagcgtatcaagccagaggtctgggacgtattg
gaagaggtcatcaaagatcatccggtcctgctgaaccgcgccccaacgctgcacagactt
ggtattcaggcctttgaagccgtcctggtagagggtagcgccatccaactgcacccgctc
gtctgttcagccttcaacgctgacttcgacggtgaccagatggccgtgcacgttccattg
tctgacaaggcacaggacgaagcccgccagttcatgatgtcgactcgtaacctgctgtca
ccggcccacggtgagccatcaatcggcgctagccaggacatggtgttgggctgttactac
ctgacacaggaacgccccaataagaagggcgagggtcgcgtcttcacagatgccggagag
gccttgctggcctatgataacggcgtcatcgatctgcaggcaccgatcagagtgcgtctg
ggtgagatcgacatctatgatcaggcaccgcctgagaaggtgacgatgcattcgagcaac
aagctcgtaaaaaccaccgttgggcgcatcatcttcaacgaagtcctgccagagcgtatc
cgtttcaagaactacgctatgaagaaagagaacttgaagcaggttatcggcgaatgcttt
aaagagtacgggcgtgtcaaaacgaccgaccttgccgatgacatcaagcgcctcggcttc
acctttgccaccaaagccggtaccaccgtcgcaattagtgacgtaaaagtaccagaaggc
aaagccgcagagctgatcaaagcggatgccaagattgccgaactgcaagagcagtttcat
gacggtctgatcaccgaaaatgagagatacttgcagacaatctcgacctggaacgaagcc
accgacaacgtacagaagatggtacgttcggtgctcgatccatttggttccatctacacc
atcgcagagtctggtgcgacaaaagcgaagttccaacagattcgtcagttgtcaggtatg
cgcggactgatggcaagtccatcgggccgtatcatcgacatcccgatccgtggtaacttc
cgtgaaggactgaacgtctccgagtacttcatcagcactcacggagcccgtaaaggcctc
gcagacaccgctctacgaacagcagagtctggctacctgacccgacgtcttatcgacgtt
gcgcaggatgctatcgtcactgaagaggattgtggcacaactgatggtataatgattacg
gacttcgactcgaaggatatggccctggagaactcacgtggtcgtctacttggacgtgtc
ctcgctgagccaattccagagttgccacatctggacgtcaacgaagagctttcagatgac
gacgtcgacgagatcgtcgccgccaacatcaaagctgttcgcgttcgctccgtactcaac
tgtctggcacgacgcggtatctgccgcaagtgttacggacgagacctggcggctaatgcc
cttgcacgcataggcgcagccgttggtatcatcgccgcccaatcgatcggtgagcctgga
acacagttaaccatgcgtaccttccacactggtggtatcgccggtgcgcaaggagacatc
acccagggtctgccgcgtgtagaagagttgttcgaagcacgtgtcccgaaagataaagcg
gagatcagtgagatcgacggcatcgtagagattatcaaggaagagggcagtaatgctcgc
actatccgcatcgtctcaacgaacgtcttcttcgacgaatatctcaagccgaagggcacc
gagatgaaagtcgtcgtcaacgaacacgatcacgtccagaaggaccagatcatcgccttg
atctcggacgagcggagtagcgaaccaacgcctatcatggctcgtactgatggagagatc
atcttcaacgaagatgaaagcctctcgatccgttttgaagagcgtgaagagcgatcgtac
gccgtaccagtctcgcgtaacatcgtcgtcaccgaaggccagaagatccaggccggaacc
ccgatcacctcgggtcagcgagacccgcaggatgttctgagaattcagggacgagaagcc
gtacagttgtatctcaccaaagaggtccagcgcgtataccgcaacaccggtgtgtatatc
catgataaacacatcgaagtgatcgtccgtcagatgttgcgccgcgtaaaggtcgacgat
tccggtgataccgagatgctaccgaacgatctcgttgatcgtttcttgtatgcggatgcc
aacgcgcacgttctggctgaaggcggagagcccgccacagcctcgaccgtattgctaggc
gtcaccaaagcatccttgaataccgatagcttcctggctgcggcctccttccaggagacc
acacgcgtactaacggaagccgcgatcgaagcacagaccgaccatctggtaggtttgaaa
gaaaacgtcatcatcggcaagctgatcccggccggatctggtatcgcgcaacggcgtcga
gaccagctagccagacagcaggcagccgcagcgagagccgcagccgccgcccccgtcgta
gcgggagtcctgggaggcatgccagtaggcgcaagtgccccacttggcctcacacttgac
agtgatggcaatgagtga
DBGET
integrated database retrieval system
