Ktedonobacteria bacterium brp13: ccbrp13_56980
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Entry
ccbrp13_56980 CDS
T09592
Symbol
recD2_1
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ccbrp13_56980 (recD2_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_56980 (recD2_1)
Enzymes [BR:
kbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ccbrp13_56980 (recD2_1)
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ccbrp13_56980 (recD2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
PIF1
AAA_11
NPHP3_N
nSTAND3
Mg_chelatase
AAA_28
Y2_Tnp
DNA_pol_lambd_f
AAA_22
UvrD-helicase
Helicase_RecD
AAA
PhoH
AAA_16
NACHT
SRP54
ABC_tran
ILVD_EDD_N
UvrD_C
HHH
Rad17
Motif
Other DBs
NCBI-ProteinID:
BCL83233
UniProt:
A0A7I8F2S4
LinkDB
All DBs
Position
7032534..7034786
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AA seq
750 aa
AA seq
DB search
MIVSSETSQPEGRRSLHPTAEQMQGIVERVTYHAEDLGYTIARFKTPGTRDLVTIAGHFP
TIQAGQTLRLIGSWREHPKYGPQFQVTHAQEMKPATLTGIEKYLGSGLIKGIGPVTAKRI
VAYFGLETLEIIETESARLIEVPGMAHKRVEMVTSAWAAQKAIKEVMVFLQGHGVSTTYA
VKIFKQYGNQSIEVVSTNPYQLATDIYGIGFITADTIARNMGVAPDAPFRYQAGITHVLS
GASEDGHCFLPHDDLVVRVVTQLALPEHPVDPERIIALIAEMGKSNQLILQSGYGDLEAQ
QICYTPAFYHTEMALAARLTAFVQTPVEVDMPRVQRWIAGYTQKMGITLSEEQRRAVELA
ASSRVLVLTGGPGCGKTFTTKTIAALWKAMGKSLLLAAPTGRAAQRLAEMTKREATTIHR
LLAFDPKTMQFRFNEQHPLEAEAIILDETSMLDLFLAHSLVKAIPPGAQVLLVGDIDQLP
SVGPGMVLRDIIASERIPVLRLTEVFRQAQASHIITNAHRINAGQFPHLTPTTKFAASDC
LWLEAAEPALGAEGIVHLVRDYLPAHGIDPVRNVQILSPGTRGDSGTRSLNTLLQRVLNP
PAPGKDELTRGGSILRVGDRVIQQVNDYTREVFNGDIGTITSIDVEEQDIVVQFTDRLVT
YDYADLSELALAWAVTVHKSQGSEYPVVILPLFMQHYLLLTRNLLYTGLTRAKQLAILVG
PTKTIGFAVKRVMDQQRYTALADRLQKHPR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtgtcatctgagacatcgcaaccggaagggaggcgctcgttgcatcccaccgcg
gagcagatgcagggtattgtggagcgggtcacctatcacgcagaggatttgggatatacg
attgctcgcttcaagacgccaggcacgcgcgatctggtaacgatcgcaggacattttcca
accatccaggccgggcaaacgcttcgactgatcggctcctggcgcgagcatccaaagtat
ggaccacaatttcaggtaacgcatgcccaggagatgaaacctgcgacgttgaccggtatc
gagaaataccttgggagtggtttgataaaaggcattggtccggtcactgcgaaaaggatc
gtcgcctactttggtctggaaacgcttgagattatcgaaaccgagagcgcacgactgatc
gaggtccctggaatggcgcataagcgggtcgagatggtcacgtcagcctgggcggcgcag
aaggccatcaaagaagtgatggtctttctgcaagggcacggagtctcgacgacctatgcc
gtcaaaatcttcaagcagtatgggaaccagtcgatcgaagttgtgtccaccaacccctat
cagctcgcgacagatatctatggcatcggatttattaccgctgacacgattgctcgtaac
atgggagtggcccctgatgctccgttccgctatcaggcaggaattacccatgtactcagt
ggagcatccgaggacggacattgcttcttgccacacgacgatcttgtggtgcgtgtcgta
acgcaattggccctcccagagcatccagtcgatcctgagcgcatcatcgctctcattgcc
gagatgggcaaatcgaaccaacttattctccaatctggctacggagacctcgaagcgcag
cagatatgctatacgccagcgttttatcatacggaaatggctctggcggcacgactcacg
gcatttgttcagacaccggtggaggtggatatgccacgtgtgcagcgctggattgcggga
tatacgcagaaaatgggcatcaccttatcggaggagcaacgccgggccgttgaactggcg
gcctcttcgcgtgtgttggtgttaacgggaggaccaggatgcgggaagacgttcacgacg
aaaaccattgccgccctatggaaagcgatgggcaaatcgctgctgctggctgctccgacg
ggccgagcagcacaacgactcgccgagatgaccaaacgcgaggctacgaccatccatcgt
cttctggcctttgatcccaaaaccatgcagtttcgcttcaacgagcagcatcccctggag
gccgaggccatcattctggatgaaacctctatgctggatctgttcctggcgcattccctt
gtgaaggcgattccacccggagcccaggtgctactggtaggcgatattgatcaattgccc
agtgtcggacctgggatggtactgcgtgacatcattgcttctgagcgcattcccgtgctt
cggctgaccgaagtgttccgccaggctcaagcgagccatatcatcaccaatgctcatcgt
atcaacgcgggtcagtttcctcatctgacgccaaccacaaaatttgccgcatcggattgt
ctgtggctggaggcggcagagcctgcacttggagcagaggggatcgtgcatctggttcgt
gattacttgcctgctcatgggattgatccagtaaggaacgtgcagattctctctcctggc
acccgtggagatagtggaacacgctctctcaatacgctacttcagcgcgtactcaatcca
ccggccccaggaaaggatgaactgacacgtggaggaagtattttacgcgtcggagatcgg
gtgatccagcaggtcaacgactacacgcgggaggtcttcaacggagatatcggcacgatc
acaagcattgatgtggaggagcaagacatcgtcgtccagtttacggatcgtctggtgacc
tacgactatgccgatctctctgaattggctctcgcctgggcagtgacggtacacaaatcg
caggggagtgaatatccagtagtgattctgcccctcttcatgcagcattacctgctcctg
acgcgcaacttgctctatacagggctcacgcgagcgaaacaactcgccatcctggttgga
ccgacaaaaacgattggctttgcggtcaagcgtgtcatggaccaacagcgatatacagcg
ctcgccgaccgcctacagaaacatccccgctaa
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