Ktedonobacteria bacterium brp13: ccbrp13_67780
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Entry
ccbrp13_67780 CDS
T09592
Symbol
recD2_2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kbb
Ktedonobacteria bacterium brp13
Pathway
kbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ccbrp13_67780 (recD2_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbb03400
]
ccbrp13_67780 (recD2_2)
Enzymes [BR:
kbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ccbrp13_67780 (recD2_2)
DNA repair and recombination proteins [BR:
kbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ccbrp13_67780 (recD2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_22
T2SSE
AAA_12
AAA_28
AAA_29
nSTAND3
NAT10_TcmA_helicase
UvrD-helicase
NACHT
MeaB
ABC_tran
FtsK_SpoIIIE
UvrD_C
DEAD
AAA_16
PIF1
YkcB_C
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BCL84313
LinkDB
All DBs
Position
8330747..8333068
Genome browser
AA seq
773 aa
AA seq
DB search
MQKLEGSIENIVFQNADNHYTVARFRPDERNRLFRNGLTTIVGALPGVRPGEVLTVEGEW
ETDARYGRQLRVESFVQRLPTSSEGMIRYLSSGLIKGIGPRKAQAIVDHFGAQTLAIIEQ
QPDLLHQVKGISQKDCERIEKAWLEQTEIKELHLFLQAHEVSINMATRIYKQYGKDAIHV
VRENPYQLAEEVQGIGFRTADEIAIKLGLPQDSIPRLASGLKYILTQAANDDGHCFLYEG
DLKRRATAILQANPALLEVAMEQLRTEHDIFIEQPAHLTAELAQSSQREQLPDAEALWFE
EQALAHEPEEEQERVYFAPFWYAESGSVRLLRILQNSATSLPPTSERQWQLVFERLQERY
KMVLTERQSAAVQLAYQRKVSILTGGPGTGKSTSLRALLMLLRTRKIQFALAAPTGRAAK
RMTEATGVQAKTLHRLLEYAPHDNSYQRNEDYPLPYQFVIVDEFSMVDILLFYNLLKALP
RTCHLLLVGDADQLPSVGPGNVLRDLLRSEALPTVRLLELFRQAEQSKIIVNAHQINRGE
MPVLKVETDSDFFFMREDDPMRAQQLIVDLVKRRLPARYHFDPITDIQVLAPMYKGAVGV
TLLNERLQAELNSADRAQVEWGDRIFRIGDKVMQTRNNYDKGVYNGDVGFIRRIDRENAE
VRVEFSEEAGPLLVEYEFHELDELVLAYAITVHKSQGSEYPVIIVPLVHEHRMLLQRNLL
YTAITRAKRFCVLVGQPSALEHAVRNDRVALRNTGLAERLLTMSRSEQGMPAI
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagctcgaaggttccattgaaaatattgtctttcagaacgccgacaaccactat
actgttgcgcgttttcgcccggacgagcgtaatcggctctttcgcaatggtctgacgacg
atcgttggtgcgctaccaggcgtgcgtccgggcgaggtcctgaccgttgaaggtgaatgg
gagaccgatgcccgttatggacggcaacttcgtgtagagagttttgtgcagcgcctgccg
acatcgagcgaagggatgattcgctatctgagttcgggactgattaaaggcattggcccg
cgcaaagctcaagcgattgtcgatcattttggagcgcagacactagcgattatcgagcag
cagccggacctattgcatcaggtgaaggggattagccagaaggattgtgaacgcatcgag
aaagcctggttggagcagacagagattaaagaactgcatctgttcttgcaggcgcatgag
gtgtcgatcaatatggcgacacgtatctataagcagtacgggaaggatgccattcacgtt
gtgcgcgagaatccgtatcaactggctgaagaggtccaggggattggtttccgcacagca
gatgagattgccatcaagcttggcctgccacaagatagtattcctcgtctggcgagcggg
ctcaagtatattctcacacaagcagccaacgatgatggacattgcttcctgtatgaaggt
gatcttaagcgccgcgccaccgctattctacaggcgaatcctgcattgctagaagtagcg
atggaacagttacgtaccgagcacgatatttttatcgagcaacctgcccatctcactgcc
gaactcgcccaatcttcacagcgtgagcagctacctgatgccgaggcgctctggtttgaa
gagcaggcactcgcgcatgaaccagaagaagagcaagagcgcgtctattttgccccgttc
tggtatgcggagagcggatctgtacggctgttacgtatcttacaaaactctgcaaccagc
ttgcctcccacatcggagcgccaatggcaattggtctttgaacggctccaggaacgctat
aagatggtactgacagaacgacaaagtgcagcagtacaactggcgtatcaacgcaaggtc
tctattctgactggcggaccgggtaccggtaaatcaacctctttacgggcgttgctgatg
cttttgcggaccaggaaaatccaatttgccctggccgcgccgaccgggcgtgcggccaag
cgtatgactgaggctacaggtgtgcaagcaaaaacactgcaccgcctgctagaatatgct
cctcatgataatagctatcagcgtaacgaagattatccattgccctatcagtttgtgatc
gttgatgagttctcgatggtcgacatcttattgttctataatctactcaaggcgcttcct
cgcacatgccacctgttgctggttggggatgcagatcaactcccttcggttggacccggt
aatgttttgcgcgatctactccgtagtgaggcgctcccaactgtacgcttgcttgaactg
tttcgtcaggcggagcagagtaagattatcgtcaatgcacaccagatcaatcgtggtgag
atgcccgtactcaaggttgagacggatagcgacttcttctttatgcgtgaagatgatcct
atgcgtgcgcagcaattgatcgtggatctggtaaaacgccgtctcccggcgcgctaccac
tttgatccgattaccgatatccaggtgcttgctcctatgtacaaaggtgcagtgggggtg
actctattaaatgagcgtttgcaggccgagttaaatagtgctgatcgggcccaggttgaa
tggggagatcggatttttcgcatcggcgataaagtaatgcagaccaggaacaactacgat
aaaggtgtttataatggggatgtgggctttattcgtcgtattgatcgcgagaatgccgag
gtgcgtgtcgagttctctgaagaggctgggccactccttgtcgaatatgagtttcatgag
ttagatgagctggtgctggcctacgccatcaccgtccataagagtcagggtagcgagtat
ccagtgatcatcgtaccactggtccatgagcatcgtatgttgctccaacgcaacttgctt
tatacggctattacgcgtgccaaacgcttctgtgttctggttgggcagccctcagcgcta
gagcatgcagtgcgcaacgatcgagtggccttgcgcaataccgggttggctgaacgtcta
cttactatgagtcgcagtgagcaagggatgccagccatatag
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