KEGG   Candidatus Kaistella beijingensis: J4771_01605
Entry
J4771_01605       CDS       T07870                                 
Name
(GenBank) hypothetical protein
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
kbe  Candidatus Kaistella beijingensis
Pathway
kbe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:kbe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    J4771_01605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kbe03400]
    J4771_01605
Enzymes [BR:kbe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     J4771_01605
DNA repair and recombination proteins [BR:kbe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     J4771_01605
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco
Other DBs
NCBI-ProteinID: UBB90072
LinkDB
Position
complement(347208..347933)
AA seq 241 aa
MPEGPTIVVFKKKLEKFSGKTVTESGGYNNPYQDQISGKKLISLGTFGKYLLLDFGDFFI
TVHFGLYGSFLIKEQKKVNPSFTLFFGEDYVNFYVVKIKKIDDKNIFNEKLNVFSEQYDV
AATEELLIGKKFLTQKVGDVLMNQDIFPGVGNIIRNEVLFMSDIHPESIVGKIPQEKIRE
LLQNIRKFSLASVPLIEGKIWKSSAAVYQKQLYKGDEVTEYVSQKIKRKTFVNEKTQKLY
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgccggaaggaccaaccattgttgttttcaagaaaaagcttgaaaagttttcgggtaaa
accgtcacggaaagtggtggttacaacaacccttatcaagaccagatctctggtaaaaaa
ctaatttctttgggcacttttgggaaatatctccttcttgatttcggagatttttttatt
accgtacattttggtttgtatggaagttttttaattaaggagcagaaaaaagtgaatccc
agtttcaccctcttttttggcgaagattatgttaatttttatgtggtaaaaattaaaaaa
atcgacgataaaaatatatttaatgagaagttgaatgttttttctgagcaatacgatgtt
gcagcaacggaagaattattgattggcaaaaaatttcttacacagaaagttggtgatgta
ctgatgaaccaagatatttttccaggcgtcgggaacattattcgcaatgaagttcttttc
atgagcgacattcatccggaaagcattgtgggaaaaattccccaagaaaaaatacgggaa
ttactccaaaatattcgcaagttttctcttgcttctgtaccattgattgagggtaaaatt
tggaaatcttccgcagcagtttatcagaaacaactttataaaggcgatgaagttactgaa
tatgtttcccaaaaaattaagcgcaaaacatttgtgaacgaaaaaactcagaaactttac
cgctaa

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