Candidatus Kaistella beijingensis: J4771_01610
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Entry
J4771_01610 CDS
T07870
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kbe
Candidatus Kaistella beijingensis
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbe03032
]
J4771_01610
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_01610
Enzymes [BR:
kbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J4771_01610
DNA replication proteins [BR:
kbe03032
]
Prokaryotic type
DNA Topoisomerases
J4771_01610
DNA repair and recombination proteins [BR:
kbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4771_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4430
Motif
Other DBs
NCBI-ProteinID:
UBB90994
LinkDB
All DBs
Position
complement(347968..349071)
Genome browser
AA seq
367 aa
AA seq
DB search
METQTAEIISSLKPSKILKIMKDPVKSAKAVSLIYTTDQEQDGIYRRKSGKKFVYFNGDE
KIKDKEEIERINKLAIPPAWENVWICALKNGHLQATGIDAKQRKQYRYHPLWNALRNHTK
FYRMLQFGYALPKMRLQLEKDLAIKSLEKRKVLAVVVSLMERTNIRIGNNIYEKLYGSFG
LTTLKDKHVDIKGQKLKFSFKGKKGVYHDIELKNAKLAKAVQNCKDIPGKELFQYYDENG
QRHAIESGMVNDYIKEISGDDFTAKDFRTWSGTVNALIAFKEIGEAESDKEYKSKVKEAL
EKVAAHLGNTATVCRKYYVHPLVINLYENKSIKKYLDELDQIEINDGKAGLTKEETIVMK
MLENEKL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaaaccgcagagatcatttcatctctcaaaccgtctaaaatccttaaaatt
atgaaggatccggtaaaatctgctaaagcggtaagtttgatttataccaccgatcaggag
caagacggaatttaccgaagaaaatcaggtaaaaagttcgtttattttaatggggatgag
aaaatcaaagacaaagaagaaattgagcgaatcaacaaactcgccattcctcccgcttgg
gaaaatgtgtggatttgtgcacttaaaaatggtcatcttcaagcaaccggaattgatgca
aaacagcggaaacaatatcgctatcatcccctgtggaatgcgcttcggaatcataccaaa
ttttacagaatgttgcaattcggttacgcattgccgaaaatgagacttcagttggaaaaa
gatttggctataaaatctttggaaaaaaggaaagttcttgccgtggtagtaagtttaatg
gaaagaaccaacattcgtataggaaacaatatttacgaaaaattgtacggttcatttggt
ttaacaacgcttaaagataaacatgttgatataaaaggtcaaaagctaaaattttctttc
aaaggaaaaaaaggagtttatcatgacattgaactgaaaaatgcgaaacttgccaaagcc
gtgcaaaactgtaaagacattccgggaaaagaactgttccaatattatgatgaaaacgga
cagcgacatgccatcgaaagcggaatggtgaatgactacatcaaagaaatcagcggcgac
gactttacagcaaaagattttagaacctggagcggaacggtaaatgcattaatcgccttt
aaagaaattggtgaagcagaaagtgataaagaatacaaatcgaaagtaaaagaagctctg
gaaaaggttgccgcacatttgggaaataccgcgaccgtttgccgaaaatattatgtgcat
cctttggtaatcaatctttacgaaaataaatcgattaaaaaatacctggacgaacttgat
caaattgagattaacgatggcaaagccggtttaactaaggaagaaaccattgtaatgaaa
atgctggaaaatgaaaaactttag
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