Candidatus Kaistella beijingensis: J4771_01770
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Entry
J4771_01770 CDS
T07870
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4771_01770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbe03021
]
J4771_01770
Transcription machinery [BR:
kbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4771_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
UBB90104
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All DBs
Position
complement(386180..387046)
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQKIRAGDRVALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAKVLDMSEDDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALQTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaattacaaagcaggttaccaacagagaaaccgcatcgctcgacaag
tatttgcaggaaatcggaaaagtggatctgattacagcagatgaagaagtggaactcgcg
caaaaaattcgcgcaggagacagagttgcactggaaaaactgattaaggcgaatttgcgt
ttcgtggtttctgtttctaaacaataccaaaatcagggactttcacttcccgatttgatt
aacgaaggaaacctcggtttgatgaaggcggctaaaagatatgacgaaacgagaggtttt
aagttcatttcttatgcagtttggtggattcgccagtcgattttgcaggctttggcggaa
cagtcgagaattgtgagattgccattgaataagattggttccatcaacaaaatcaacaaa
gcttacgcacatttggagcaggaaaatgaaagaccaccttctccggaagaattggcgaaa
gtgttggatatgagcgaagacgacatcaaggaatccatgaaaaattccggccgtcactta
tcgatggacgcaccacttgtggaaggtgaagattctaatttgtacgacgttttacgttcc
ggtgaatcaccaagtcctgataaagatttgatgcttgaatcgctgcaaatcgagattgag
agagcattgcaaactttgacgccgagagaagcggatttggttcgactttatttcggactg
aatggaaagcatccgatgactttggaagaaattggtgaaacatttgatttgacgagagaa
agagttcgtcaaattaaagagaaagcaatcaagagattgaaacataatacgagaagtaag
attttgaagtcttatcttggcaagtaa
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