Candidatus Kaistella beijingensis: J4771_01980
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Entry
J4771_01980 CDS
T07870
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe00541
Biosynthesis of various nucleotide sugars
kbe01100
Metabolic pathways
kbe01250
Biosynthesis of nucleotide sugars
Module
kbe_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J4771_01980 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kbe01005
]
J4771_01980 (kdsA)
Enzymes [BR:
kbe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
J4771_01980 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
kbe01005
]
Lipid A
J4771_01980 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
IFT81_CH
Motif
Other DBs
NCBI-ProteinID:
UBB90146
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All DBs
Position
429910..430719
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AA seq
269 aa
AA seq
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MIQFLENIHHKNSKNFFLIAGPCIIEGEDMALRIAEKVVEITNRYEIPYIFKGSFKKANR
SRVDSFTTIGEEKSLQILKKVGETFNIPTTTDIHENEHAALAAQYVEVLQIPAFLVRQTD
LLIAAAKTGKCVTLKKGQFLSPESMKFAVEKVKDSGNEKAAIIERGNSFGYTDLVVDFRG
IPTMRNFAPVILDVTHSLQQPNQNSGVTGGRPELIETIAKAGIAVGTDGLFIETHPDPSC
ALSDGANMLKLDKLDDLLKKLTRLREAIL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgatacaattcctagaaaacatccaccacaaaaattcaaaaaacttctttctcattgcc
ggtccatgcatcattgaaggggaagacatggccttaagaattgccgaaaaagtggttgaa
attaccaacagatatgaaattccctacatcttcaaaggaagttttaaaaaagccaaccgc
agcagagtagattcttttaccacaattggtgaagaaaaatctttacaaattttaaagaaa
gtaggagagactttcaatattcctactacaacggatattcatgaaaacgaacacgctgca
ctggctgcacaatatgtagaggtgttgcaaattcccgcatttttggttcgtcaaacagac
ttattgattgcagcagcaaaaacaggaaaatgtgtgactttgaaaaaaggacagttcctt
tctcccgaatccatgaaatttgcagtggaaaaagtgaaagattccggcaacgaaaaagca
gcgatcatcgagcggggaaattctttcggttacaccgatttggtggtggatttccgtggg
attcctacgatgcgaaattttgcaccggtgattttggatgttactcattctttgcagcaa
ccgaaccaaaattcaggcgttacgggaggtagaccagaattgattgaaaccatcgcaaaa
gctggaattgcagtgggaaccgacggtcttttcatcgaaactcatcccgatccaagttgc
gcactttctgatggagccaatatgttaaagctagataaactcgatgatttgctgaaaaaa
ttaacaagattgagagaagcgattctgtaa
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