Candidatus Kaistella beijingensis: J4771_02840
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Entry
J4771_02840 CDS
T07870
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kbe
Candidatus Kaistella beijingensis
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kbe03016
]
J4771_02840 (truB)
Enzymes [BR:
kbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4771_02840 (truB)
Transfer RNA biogenesis [BR:
kbe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4771_02840 (truB)
Prokaryotic type
J4771_02840 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UBB90312
LinkDB
All DBs
Position
complement(616567..617271)
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AA seq
234 aa
AA seq
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MKTDKDFLDGQIILLDKPLDWTSFQAVNKLKYKLKKEFNLPKKFKIGHAGTLDPRATGLL
IVCTGKFTKKIPEIQDAPKEYLTEIKIGVQTESYDTEKPEILHEDFSHISSEFIHEVLEK
FVGEIEQKPPIFSAIKIAGKRAYDLARKGDEVEMKSRKTTIHYLKDVEIDLPFVRFTVGC
SKGTYIRSLAHDIGQELGVGAYLTNLRRTKIGAYSIENASSNYLENDYGFSADF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccgataaagattttttggatggacaaatcatcctcttagacaaacctctggat
tggacgagttttcaggcagtcaacaaactcaaatacaaactcaaaaaagagtttaacctc
ccgaaaaaattcaagatcggtcatgcaggaactttggatccgcgcgcaacaggtttgctc
attgtctgcacaggaaagttcaccaaaaaaattcccgaaatccaggacgcaccgaaagaa
tatttaacggaaataaaaattggcgttcaaaccgaatcttacgacaccgaaaaacccgaa
attctgcatgaggatttttcacatatttcttcggaatttattcatgaagttttagaaaaa
tttgtaggagaaatcgaacagaaaccacccattttttccgccattaaaattgctgggaaa
cgtgcctacgatttggcgagaaaaggagacgaagtagaaatgaaatcccgaaaaaccacc
attcattatttaaaggatgttgaaattgatttaccttttgttcgttttaccgttggttgt
tctaaaggaacttacattagaagtttagctcacgacattggtcaggaattgggagttggt
gcgtatttgacaaatttaagaagaacaaaaataggggcgtattctattgaaaatgcatcg
tcaaattacttagaaaacgattatggattttctgcggatttttaa
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