Candidatus Kaistella beijingensis: J4771_03675
Help
Entry
J4771_03675 CDS
T07870
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe00550
Peptidoglycan biosynthesis
kbe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J4771_03675 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kbe01002
]
J4771_03675 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kbe01011
]
J4771_03675 (dacB)
Enzymes [BR:
kbe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J4771_03675 (dacB)
Peptidases and inhibitors [BR:
kbe01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
J4771_03675 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
kbe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
J4771_03675 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
DUF6891
Motif
Other DBs
NCBI-ProteinID:
UBB90467
LinkDB
All DBs
Position
complement(784152..785600)
Genome browser
AA seq
482 aa
AA seq
DB search
MIRLKNIFVSTAISLSAFAFGQGTFTSNTYPQSYETSSSITTSSEKLMSAKELVDININA
MMNDPVLRNANWGFVIYDPKTKKVVSSYNENASLIPASTTKLLTTETAMSLLGEKFKWIT
QLEHSGTIDDEGNLNGNLYIVGSGDPSMGTNKAGAASYRDIITDFIMAMGEKGIKKVNGD
IIIQTAVFKANKMQKLPENIVWLENGNYYLPVGTTSEINPANEKLIAKSSNPFSESKNYY
YISPYIKQMVYAEKFDGGYLTTKLPDAPAYLANSLRASMVKSGIPVIGKVVAKMTDPNPE
KREMITNYQSPTLSDIVFYTNQHSDNALAEATLRMVGFQKNGDQTLESGRNVVVEHLKSK
GFDTNGLNYMDGSGLSRSNLVTPISQVKFLTNLMNEKYYRSYFDSLPIAGQTGTLKKSFF
GSGYGQINAKTGTLNKVKTLAGYMKTNSGKTLVFSLLINNYAGSVDQVKARMEQLLDPAM
NL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgattagactaaaaaatatatttgtatcaacagcgatttcgctttcggcattcgctttt
ggacaaggaactttcacctctaatacttacccacaatcttacgaaacttcatcatctata
acgacctcctctgaaaaactgatgagcgcaaaagaattggtggatatcaacatcaatgcg
atgatgaacgatcctgttttgcgtaatgcaaattggggtttcgtgatttacgatccaaaa
accaagaaagtggtaagttcttacaatgaaaatgcttcattaatccctgcttccaccact
aaacttttaaccacagaaactgcaatgagtcttctaggcgaaaagttcaagtggattacg
cagttggaacattcgggaacaattgatgatgaaggaaatctcaacggaaatctttacatt
gtagggagcggcgatccttcaatgggcacaaacaaagctggagcagcttcttatcgcgac
attatcactgatttcatcatggcgatgggagagaagggaattaaaaaggtaaacggcgat
atcattattcaaactgcagttttcaaagcgaataagatgcaaaaacttcctgagaatatt
gtttggctcgaaaacgggaattattatttaccggttggaactacttctgaaatcaaccca
gcaaacgaaaaattaatcgcgaagtcatcaaaccctttttccgaaagcaaaaactactat
tatatttcgccctacatcaaacaaatggtttatgcggaaaaatttgacggtggttattta
acgactaaacttccagacgcacctgcatatcttgccaatagtttgcgagcaagtatggtg
aaaagcggaattccggttattggaaaagtggttgccaaaatgaccgatccaaatcctgaa
aaacgtgaaatgattaccaattatcaatcaccaactttgtctgacatcgttttctatacg
aatcaacatagtgacaatgctttagcggaggcgactttacgaatggtaggttttcaaaaa
aatggtgatcaaacgttggaatctgggagaaatgtggtagtggaacatttaaaatctaaa
ggtttcgataccaatggtttgaactatatggacggaagcggactttccagaagcaatttg
gtgacaccaatttctcaggtgaagtttcttaccaatttgatgaatgagaaatattacaga
tcctattttgattctttgccaatcgcaggacaaaccgggactttgaaaaaatcatttttt
ggaagtggatatgggcaaatcaatgcaaaaacgggaactttgaataaagtaaagacactt
gctggatacatgaaaaccaattctggcaaaactttagtattctctttgctgattaacaat
tatgctggttctgtggatcaggttaaggcaagaatggaacaattacttgatcctgccatg
aatctttaa
DBGET
integrated database retrieval system
