Candidatus Kaistella beijingensis: J4771_03855
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Entry
J4771_03855 CDS
T07870
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe03030
DNA replication
kbe03410
Base excision repair
kbe03420
Nucleotide excision repair
kbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4771_03855 (polA)
03410 Base excision repair
J4771_03855 (polA)
03420 Nucleotide excision repair
J4771_03855 (polA)
03440 Homologous recombination
J4771_03855 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbe03032
]
J4771_03855 (polA)
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_03855 (polA)
Enzymes [BR:
kbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4771_03855 (polA)
DNA replication proteins [BR:
kbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J4771_03855 (polA)
DNA repair and recombination proteins [BR:
kbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J4771_03855 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4771_03855 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DUF2202
HHH
Motif
Other DBs
NCBI-ProteinID:
UBB90500
LinkDB
All DBs
Position
complement(827855..830698)
Genome browser
AA seq
947 aa
AA seq
DB search
MTHDNNDKRLFLIDAYAMIFRGYYALIRSPRMTSKGLDTSAIFGFTNSLIELIRREKPSH
LAVVFDVGEASVRTADFSDYKANRSETPEAIKIAIPYIHRILEAMYVPILGVEGYEADDV
IGTIACKAEAEGYKVFMVTPDKDFAQCVTENIKIYKPGLKGAEFEILGVPEVLAKYEIED
PKQVIDFLAMMGDSVDNIPGLEGVGEKTAKKFLKEYGSIENLLANTDKITGKLREKVENS
AERGILSKKLATILCDAPIEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFSNEQ
SAISNQLSADPNKVSRYDKKAEEKSGPVQLDLFANFEELEQATTTKTTIENNDHLYQYID
SPKAQKILVQNLLKQNAVCFDTETTSLNEMEAELIGMSFSYKKGLAYYIPLSENREEVLE
TLEIFRPFFEKKEILKIAHNLKFDYKILKQYGIDVDGAIFDTMIAHYLLNPDGRHGMDYL
SEMYLNYKPVAIETLIGKGKNQTTLRSASVEEQTKYAGEDADVTWQLYEIFAPQLKKENL
EDLFYKVEMPLMKVLAKMELEGISLDKNWLEQESKDLESDIRELEKKIFEFAGEEFNMNS
PKQLGEILFEKMQLDPKAKKTKTGQYATSEDVLQKLSAKHEIIKYILEYRTYQKLKSTYV
DALPNQIDKDDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFKADEGNKI
ISADYSQIELRLIAEISNEENMIKAFQNGEDIHASTASKLFNVPLEEVTKTQRSQAKTVN
FGIIYGQGAFGLAEQTGLSRTEAKQMIENYFATYPQLKKYMAEQVQKAQDLGYVETILNR
KRHLKDINSANFVVKAHAERNAVNAPIQGSAADVIKLAMIKIDEKLQEKNLKTKMLLQVH
DELVFEAPIEEIETAKKLIKTEMESAFDTKVPLLVEVGVGDNWLEAH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgacacacgacaacaacgacaaacgtcttttcctcatcgatgcctatgcgatgattttc
cgaggttattatgccctcatcagaagtcccagaatgacgagcaaaggtttggatacttca
gccatttttggatttaccaattctttgattgaactgattcgtagagaaaaaccttcgcat
ttggcggtagtttttgatgtaggagaagcaagtgtcagaactgcagatttttctgattat
aaagccaatcgcagcgaaacacccgaagcgattaaaattgccattccttatattcacaga
attttggaagcgatgtacgttccgattttgggtgtggaaggttacgaagcggatgacgtg
attggaaccattgcctgcaaagcggaagcagaaggttacaaagtttttatggtgacgcct
gacaaagattttgcgcagtgtgtcactgaaaatatcaaaatttataaaccgggattaaaa
ggagcagaatttgagattttgggagttccggaagttttggcaaaatatgaaattgaagac
cccaaacaagtcattgattttctagccatgatgggcgattctgttgataatattccggga
ttggaaggcgttggtgaaaaaactgccaagaaattcctgaaagaatacggaagcattgaa
aaccttttagccaacaccgataaaattaccggcaaactccgagaaaaagttgaaaattct
gccgaacgtggaattctgtctaaaaaattagccacgattttatgtgatgcaccgatcgaa
tttcatcaggaacaatacgatttagaaacgcctgatttcgaaaaggtgaaggaggttttt
gacgaaattgaattccgaagattgtacgaaaacctttatcgtgcattttcaaatgagcaa
tcagcaatcagtaatcagctatcggctgatccgaataaagtatcgcgatacgacaaaaaa
gcggaggaaaaaagcggtcctgttcaattggatttgttcgccaattttgaagagttggaa
caggcaactacaacgaaaacgaccattgagaacaacgaccatctttaccaatacatcgat
tccccgaaagcacagaaaattttagttcaaaatcttttaaaacaaaatgcggtttgcttc
gacacggaaacgacttcgttaaatgaaatggaagccgaattaattgggatgagtttctcc
tacaaaaaaggtttggcttattatattccactctcagaaaatagagaggaggttttggag
actttagaaattttccgtccgtttttcgagaaaaaggaaatcttgaaaatcgcccacaat
ttaaaattcgactacaaaattctgaaacaatacggaattgatgttgatggagccatcttc
gacaccatgatcgcgcattatctcctcaatcccgatggaagacacggaatggattatcta
tctgaaatgtatctgaattacaaacctgtcgcaattgaaaccttgattggtaaaggaaaa
aatcaaacgacacttcgttctgcctcagttgaagaacaaacgaaatatgcgggtgaagac
gccgatgtaacttggcaattgtacgaaatcttcgctcctcaactgaaaaaagaaaactta
gaagatttgttttataaagtcgaaatgcctttgatgaaagtcttggcaaaaatggaattg
gaaggaatttctttagataaaaattggctcgaacaggaaagtaaggatttggaaagtgat
attagagaacttgaaaaaaagatttttgaatttgcgggtgaagaatttaatatgaattca
ccaaaacagttgggtgaaattttgtttgaaaaaatgcagctcgacccaaaagcgaaaaaa
acaaaaactggtcagtacgccacttccgaagatgttttacaaaaactttccgcgaaacac
gaaatcattaaatacattctcgaataccgaacttatcaaaaactgaaatcgacttatgtg
gacgccttgccgaatcagattgataaggatgataaccgagttcataccaatttctcgcaa
actacggctgcaacgggaagattagcttccgtgaatccgaacttgcaaaatattccgatt
cgaactttgcgcggacaacaaattcgtggtgcctttaaagcggatgaaggaaacaaaatt
atttcagcagattattcacaaatcgaacttcgtttaatcgccgaaatttcgaatgaggaa
aatatgattaaagcattccaaaatggagaagatattcacgcttcaacggcttcaaaattg
tttaatgttcctttggaagaagttacgaaaacccaacgttcacaggcaaaaacggtgaat
tttggaattatttacggacaaggcgcattcggtttagccgaacaaaccggactttcccga
actgaagcaaagcagatgattgaaaactatttcgccacttatcctcaactaaaaaaatat
atggcagaacaagtccaaaaagcgcaggatttgggttatgtggaaacgattttaaacagg
aagcgtcatttgaaagatattaattctgccaattttgtagtaaaagctcacgcggaaaga
aacgccgtaaatgcaccaattcagggaagtgcagccgatgttatcaaattggcgatgatt
aaaattgacgaaaaacttcaggaaaaaaatttgaaaaccaaaatgcttttgcaggttcat
gacgaattggtttttgaggcgccaatcgaagaaatagaaacggccaaaaaactcatcaaa
accgaaatggagtccgcatttgacaccaaagttcctttattggtggaagttggagtaggt
gataattggttggaagcgcattag
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