Candidatus Kaistella beijingensis: J4771_05600
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Entry
J4771_05600 CDS
T07870
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
kbe
Candidatus Kaistella beijingensis
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kbe03016
]
J4771_05600 (truA)
Enzymes [BR:
kbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
J4771_05600 (truA)
Transfer RNA biogenesis [BR:
kbe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4771_05600 (truA)
Prokaryotic type
J4771_05600 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UBB90813
LinkDB
All DBs
Position
complement(1206452..1207186)
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AA seq
244 aa
AA seq
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MRYFIEFSYHGKNYFGYQIQPREISVQQELEKALSTILREEIKTTGAGRTDTGVHAKKMF
AHFDTEQILDENLPHKLNSFLPPDISVKTIFKVKDDFHARFDATFRTYEYYISLDKNPFT
QDSSWQIWKRNLDIDKMNEACKILFEFEDFTSFAKLHTDNKTNNCKIYKAFWEQNGTELK
FTISADRFLRNMVRSIVGTMVEIGNGKLQPEDLRKIIAKKNRSSAGTSAPPQGLFLVDVG
YDFV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttcatcgaattttcataccacggtaaaaattatttcggctatcaaattcag
ccaagagaaatttcggttcagcaagaacttgaaaaagctttgtctacaatccttcgcgaa
gaaatcaaaacgacaggagcggggagaaccgacaccggagttcacgccaaaaaaatgttt
gcgcattttgataccgaacagattttagatgaaaatcttccacacaaactcaacagtttt
cttccacccgatatttcggtgaagacaatttttaaagtcaaagatgatttccatgcaaga
tttgatgcaactttccgaacttatgaatattatatttctttagataaaaatccttttact
caagattcttcttggcaaatttggaagcggaatttagatatagataaaatgaatgaagcc
tgcaaaatactttttgaatttgaggatttcacaagttttgccaaacttcacaccgacaat
aaaaccaataactgcaagatctacaaggcattttgggaacaaaacggaaccgaattgaag
ttcaccatttcagccgacagatttttgagaaatatggttcgatcgattgttggaaccatg
gttgaaattggcaacggcaaacttcaacccgaagatttacgaaaaatcatagcaaaaaaa
aaccgcagttccgcaggaacttccgcaccacctcaaggtttgtttttggtcgacgtgggt
tatgattttgtttga
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