Candidatus Kaistella beijingensis: J4771_05775
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Entry
J4771_05775 CDS
T07870
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe02020
Two-component system
kbe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4771_05775 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4771_05775 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbe03021
]
J4771_05775 (rpoN)
Transcription machinery [BR:
kbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4771_05775 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Carn_acyltransf
FtsX_ECD
Motif
Other DBs
NCBI-ProteinID:
UBB90848
LinkDB
All DBs
Position
complement(1242038..1243516)
Genome browser
AA seq
492 aa
AA seq
DB search
MLKQNLQLRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVQEESKEEDYSS
LDEGFEDEGTDSIDTDFDVNEYIFDDEPAYKTASSNYSADDEEFDNQSLLTEGQSLYDYL
LEQIRLINIEDEDLKIAEYIIGNLDNDGYLRREVKQIVDDLAFSQGVYSTKEKVTDILEN
YVQKLDPPGVGARNLQECLLLQIEKKVSADKAVILAGNILRNQFDALTNKHYNKIIQKYD
IEEEDLKDALEVISKLSPKVGGNFDTQTITINQEIIPDFVIQVKENGKKGVDVIPLLNSK
NAPTLRVSDEYKDILTTYSHDKTSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTIS
AIVKLQKDYFITGDDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFS
DSLTNDDGEEVSTKEIKTHLQEVINSENKRKPLTDDALVGLLKEKGYNIARRTIAKYREQ
LNIPVARLRKEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaaaacctacaattacgtctcgggcagaaattggcgccacagcaaatccaa
ctcatgaagttgatacagcttcacaccttggaatttgaggaagaattggagcgcgaactc
gaagaaaatccagctttggaaaaagtgcaggaagaatcaaaagaagaggactattcatct
cttgacgaaggttttgaagatgaaggaaccgacagcatcgacaccgatttcgatgttaat
gaatatatttttgacgacgaacctgcctacaaaaccgcatcaagtaattattctgcggat
gatgaagagtttgataaccagtcacttttaacggaaggtcagtcgctttacgattatctt
ttagagcaaattcgcctcatcaatatcgaggacgaagatttgaagattgcagaatacatc
atcggaaaccttgataacgacggctatcttagaagagaggtaaaacagattgtggatgat
ttggcattttcacaaggtgtttattcgacgaaagaaaaagtaaccgatattttagaaaat
tacgttcagaagttggatccacccggagttggtgcgcgaaatcttcaggaatgtctgctc
cttcaaatcgagaaaaaagtaagtgccgataaagcggtgattttggcgggaaatattctg
cgaaatcagtttgatgcattgaccaacaaacattacaataaaattattcagaaatacgat
atcgaagaagaggatttgaaagatgcattggaagtcatttcaaaactttccccaaaagtc
ggcggaaacttcgatacacagacgattaccattaatcaggaaattattcccgattttgtt
attcaagttaaagaaaatggcaaaaaaggagtggatgttattccattattgaacagcaag
aatgctccgactttgcgtgtgtccgatgaatacaaagatattttgacaacctattcccac
gataaaacttcggcggaacataaacaggctgcactttttatcaagcaaaaattagatgcg
gcgaaatggtatatcgacgcgattaaccaaagacaaaacactttgcttcagacgatttct
gcgattgtaaaactgcaaaaagattacttcattacaggtgacgacaaatctttaaaacct
atgattttaaaggatgttgcagatattacaggtttcgatatttccacgatttcacgtgtg
gtaaaaagcaaatatgcagacacgccgaatggaattgtttacttaaaaaatctcttctcc
gattctttaaccaatgacgacggtgaagaagtttctaccaaagaaattaaaacccatctt
caagaagtcattaatagcgagaacaagagaaagcctttaacagacgacgctttagttggt
ttgttgaaagaaaaagggtacaatatcgcaagaagaacgattgcaaaataccgcgaacag
ttgaatattcctgtggcgagattgagaaaagaactgtag
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