Candidatus Kaistella beijingensis: J4771_05995
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Entry
J4771_05995 CDS
T07870
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4771_05995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_05995
Enzymes [BR:
kbe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J4771_05995
DNA repair and recombination proteins [BR:
kbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4771_05995
Prokaryotic type
J4771_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UBB90890
LinkDB
All DBs
Position
complement(1287960..1288601)
Genome browser
AA seq
213 aa
AA seq
DB search
MTWTEILAPIKNSEYYENLWQKVNAEYASTKCFPPKNQIFRALELTPFDEVKVVIIGQDP
YHNDFQANGLCFSVSEEVAAPPSLRNIFTELKEDLGIERTKKELDDWAKQGVLLLNATLS
VKAHSPNSHKDLGWGKFTDFIIKEISDKKENVVFVLWGAFAQKKEVLINSSKHFIIKSAH
PSPFSVYRGFYGSRPFSRINDHLKSKNLPLISW
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacttggactgaaattcttgcccccatcaaaaactccgaatattatgaaaatctttgg
cagaaagtaaatgcggaatatgcttccacaaaatgctttccaccaaaaaatcagattttc
agagcgttggaattaacgccttttgatgaagtgaaagtagtgattattggtcaagacccg
tatcataacgattttcaagcaaatggattgtgtttttcggtttccgaggaagttgcggca
ccaccttctttaagaaacattttcacggaattgaaagaagatttaggaattgaacgtacc
aaaaaagaactcgatgattgggcgaaacaaggagtattacttctgaatgccacactttct
gtaaaggcacattcgccaaattctcacaaagatctgggttggggaaaattcaccgatttc
attataaaagaaatttccgataaaaaagaaaacgtggtttttgttctatggggagctttc
gcacaaaaaaaggaggtactcattaattcctccaaacattttattattaaatctgcccat
ccatcgccgttctcggtgtatcgtggcttttacggaagcaggcctttttctagaattaat
gatcatttaaaatcaaaaaatctcccacttatttcgtggtag
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