Candidatus Kaistella beijingensis: J4771_06305
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Entry
J4771_06305 CDS
T07870
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4771_06305 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_06305 (xth)
Enzymes [BR:
kbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J4771_06305 (xth)
DNA repair and recombination proteins [BR:
kbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4771_06305 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Herpes_IE2_3
Motif
Other DBs
NCBI-ProteinID:
UBB90949
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All DBs
Position
1357610..1358371
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AA seq
253 aa
AA seq
DB search
MRIISYNVNGIRAAFTKDLLGWLKVADPDIICIQESKAGNDQIDIESLEKLGYKSYWHSA
QRKGYSGVGIASKVEPKHIEYGCGIEHYDSEGRIIRADFEDFSVISVYVPSASNIERLDF
KLQFCYDFLDYIKELKKTVPNLVISGDFNICHKPIDIHNPEGLKNVSGFLPIEREWLSKF
IDECELIDSFRFFNDQPENYSWWSYRQNSRARNKGWRLDYNFVSYTLKEKLSRAVILKEA
VHSDHCPVMVELH
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagaattatttcttacaacgtcaacggaattcgtgctgcctttacgaaagatttgttg
ggttggcttaaagttgctgatcccgatattatctgcattcaggaaagtaaagcgggaaat
gaccaaatcgatattgaaagtttagaaaaactcggttacaaaagttattggcattctgca
caacgaaaaggttattccggagttgggatcgcctctaaagttgaacccaaacatattgaa
tacggttgcggaattgaacattacgattcagaaggaagaattattcgtgcagatttcgag
gatttttctgtgatttcggtttatgttccgtctgcttcgaatattgaaagattagatttt
aaacttcagttttgctatgattttttagactatattaaagagttaaaaaaaacagttccc
aatttggtgatttctggcgatttcaacatttgccataagccgatcgacattcacaatccg
gaaggtttgaaaaatgtttcaggatttctgccgattgaaagagaatggttgagcaaattt
attgatgagtgcgaattgattgacagttttaggttttttaatgatcaacccgaaaattat
tcgtggtggagttaccggcaaaattccagggcaagaaacaaaggttggagattggattat
aatttcgtgtcgtatacgttaaaggagaaactgtcgcgcgcagtaattcttaaggaagcc
gtacacagcgaccactgtccggtgatggtagaacttcattaa
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