Candidatus Kaistella beijingensis: J4771_07110
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Entry
J4771_07110 CDS
T07870
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe00040
Pentose and glucuronate interconversions
kbe01100
Metabolic pathways
kbe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J4771_07110
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4771_07110
Enzymes [BR:
kbe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J4771_07110
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
UBB88651
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Position
complement(1538872..1540206)
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AA seq
444 aa
AA seq
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MKKLIVIASLAFGTINLNAQVYFQANPEGYGAATTGGGNTTPVTVSDYATLKTQLTTVGS
KVILVSGTITIPQNGQISAVISNKSLIGLPGAKLVNENQTGAGILNLRSGSNNVIIRNLI
FVGPGAYDINGPDNLTNQGGTNIWVDHCEFQDGQDGNFDNSGLSDNITISWNKFTYLKAP
IPGGSGGSNDHRFSNLVGSSATDAPADGNYSITFQSNYWAEGCKERMPRARNAQLHILNS
YYNTSVPSSLAIGLGGGSKNSNVYVENTNFANVTSIFRNYVSTDGGTIAINYVNSLFKGN
PVSTTYDVGTVSKPNYSYTVMPVEQVAQYVPDPGCGAGATLLVAADGTITPGVCSFMAVE
NTEKSYVKIYPVPVKEVLNIEIPQSRGRSLQVDIFSATGRKAISTSLNNNGKAATINVQH
LPKGVYFGTLKTAENSYPVRFIKN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattgtaatagcaagtttagcttttggaacaataaatctgaatgcgcaa
gtctattttcaggcaaaccctgaaggttatggcgctgcaacaacaggtggcggaaatact
actcccgttacagtaagcgattatgcaacgctgaagacgcagctcactacagttggatcc
aaagtgattctggtttcgggaacgattaccattccgcaaaacggacaaattagcgcagta
atttctaataaatctttaataggacttcccggtgcaaagctggtgaacgaaaaccaaacc
ggcgctggaatactcaacttgcgaagtggatccaacaatgtcatcatcagaaatctaatt
ttcgttggtcccggtgcgtatgacatcaacggtcccgataacttgaccaaccaaggtgga
accaatatttgggtagatcactgtgaatttcaggatggacaagatggaaattttgataat
tcaggtttgtcggataatatcaccatctcttggaacaagttcacttatttaaaagctcca
attcctggcggttctggaggtagtaatgatcaccgtttctctaatttggtaggttcaagc
gcaaccgacgctccagctgatggaaattatagcatcacttttcagagtaattattgggca
gaaggttgcaaagaaagaatgccacgtgcaagaaatgcacaacttcacattctgaattcc
tattacaacacttctgtgccaagttcactcgcaatcggacttggtggtggttcaaaaaat
tctaatgtttatgtagagaataccaattttgctaacgtgacttcgattttcagaaattat
gtatctactgatggcggaaccattgcaatcaattacgtgaacagtctcttcaaaggaaat
cctgtgtcaacaacttatgatgtaggaactgtctcaaaaccgaattattcttatactgtg
atgccggttgaacaggttgcgcaatacgttcctgatccaggatgtggagcaggagctact
ttactagttgctgcggatggaacaattacaccgggagtttgtagttttatggcggttgaa
aataccgaaaaatcttatgtcaaaatttatccggttccagtgaaagaggttttgaatatt
gaaattccacaaagcagaggtcgaagtttacaggtggatatattttcagcaacgggaaga
aaagcgatctctacttccctcaataataatggaaaagcagcaaccatcaatgttcaacat
cttccaaaaggagtttattttgggacattaaaaactgctgaaaattcttatccagtgaga
tttatcaagaattaa
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