KEGG   Candidatus Kaistella beijingensis: J4771_11950
Entry
J4771_11950       CDS       T07870                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
kbe  Candidatus Kaistella beijingensis
Brite
KEGG Orthology (KO) [BR:kbe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kbe03400]
    J4771_11950
Enzymes [BR:kbe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J4771_11950
    5.6.2.6  RNA 3'-5' helicase
     J4771_11950
DNA repair and recombination proteins [BR:kbe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J4771_11950
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: UBB89554
LinkDB
Position
2570306..2572762
AA seq 818 aa
MPEKFQSSEGYKIVQKWLNEKDFVPFGFQMETWEKFGKNYSGMVIAPTGFGKTFSVFLAV
IIDFLNHPENYKDGLKLLWITPLRALAKDIAKAMTEAIDEIGLDWNVAVRNGDTPQSERV
SQTKKMPEILIITPESLQLLLAQKNNQRFFKSLKCVAVDEWHELLGSKRGVLVELALSQI
LSYQKNIKIWGITATIGNLDEAMEVLIPYKIKKTKVVAKEKKKIDILPVFPDEVEILPWA
GHLGGKLVDKVVPIILESKTTLVFTNTRSQAEMWYQMLLKEYPDFAGQIAIHHSSIDREL
RIWIEENLSSGYLKAAISTSSLDLGVDFKPVDTVIQIGSSKGVARFLQRAGRSGHSPFET
SKIYFVPTHSLELIEVSALKEAVKQKVIEPRIPQVMTFDVLVQFLMTLAVGDGFEEKKLF
KQIKNTFAFREISEEEWMSLLQFITIGGGALKNYQEYHKVVIENGIYKVTNRRIAMLHRM
NVGVIVSDAMMKVKFVSGGYIGMIEEYFITRLKPEDKFILAGRVLEISHIKEMTVYVRNA
KGKAQIPSYLGGRLPLTSYLSQFLRLKLSDSLQAKSFEKELKFLHPLLVNQEENSHIPKD
DEFLVEMIETRDGHHLFMYPFEGRLIHEVMSALIAFRISKITPISFSMAMNDYGFELLSS
QEIPINQENLKKILSKENLIQDVLSSVNATEMARRKFRDIAVISGMVVQNYPGLQKNNKS
LQASSGLIFNVLEDYNPENLLLKQAYTEVFNQQIDEHRLMEAFKRIENSKIILKFANAFT
PLSFPIKVDSLRQSLSSEDLDARILRLQNESMKKNKKR
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgcccgaaaaattccaatcttccgaaggctacaaaatcgttcaaaaatggttgaacgaa
aaagatttcgtgcctttcggatttcaaatggaaacttgggagaaatttgggaaaaattac
agcggaatggtcatcgcaccgactggatttggaaaaacattctctgtttttttagcggtg
atcattgactttctaaatcatccggaaaattataaagacggtttaaagttactgtggatt
acgccgcttcgtgcattggcaaaagacatcgcaaaagcaatgacagaagccatcgacgaa
ataggtctcgattggaacgtagccgttcgaaacggagatacgccacaatcggaaagggtt
tcacagaccaaaaaaatgcccgaaattttaatcatcacgcccgaaagtttgcaacttctt
ttggctcaaaaaaataatcaaagatttttcaaaagtctaaaatgtgttgcggttgacgag
tggcatgaacttttaggctcgaaacgcggtgttttggtggagttggctttgtcgcaaatt
ttatcgtatcaaaaaaatatcaaaatttggggaatcaccgcaaccatcggtaatctcgat
gaagcaatggaagttttgattccctacaaaatcaaaaaaacaaaagtcgttgccaaagaa
aaaaagaaaatcgacattcttccggtttttcctgacgaggttgaaattcttccttgggca
ggacatctaggcggaaaactcgtcgataaagtggttcccattattttggaaagcaaaacg
actttggttttcacgaacactcgaagtcaggcggaaatgtggtatcaaatgctgttgaaa
gaatatcccgattttgcaggtcaaatcgcgattcatcacagttccatcgatcgagaattg
agaatttggatcgaggaaaatttaagttcgggttatttgaaagcggcgatttcaacttcc
tcattggatttgggagtcgatttcaaaccagttgataccgtcattcaaatcggttccagc
aaaggtgtcgcgcgatttttacaacgagcgggaagaagcggacattccccatttgaaact
tcgaaaatttattttgttcccactcattccttagaattaatcgaggtttccgccttgaaa
gaagccgtgaaacaaaaagtcatcgagccaagaattccgcaagtgatgactttcgatgtg
ttggttcagtttctcatgactttggcggttggagatggttttgaggagaaaaaattattt
aagcaaatcaaaaacactttcgctttccgagaaatttcggaagaagaatggatgagttta
ttacagtttatcacaattggaggcggcgcactgaaaaattatcaggaatatcataaagtc
gtcatcgaaaacggaatttataaagtcacgaaccgcagaattgccatgcttcatcggatg
aacgtcggcgttattgtaagcgatgcgatgatgaaggtaaaattcgttagcggcggttac
atcggaatgattgaggaatatttcatcactcgcttaaaacctgaagacaaatttattttg
gcggggagagttttggaaatttcccacatcaaagaaatgacggtttatgtgagaaatgca
aaaggtaaagcgcaaattccgagttatttgggaggacgattgcctttgacctcttatttg
agtcagtttttgcgattgaaattatctgattctttgcaggcgaaatcttttgaaaaagag
ttgaaatttctgcatccgcttttggtaaatcaagaggaaaattcacatattccgaaagat
gacgagtttttggtggaaatgattgaaacccgcgatggacaccaccttttcatgtatccg
tttgaggggagattaatccatgaagtcatgtcggctttaattgcttttaggatttctaaa
attacgccgatttcgttttccatggcgatgaacgattacggttttgaattgttgagttcg
caggaaattcccatcaatcaagagaatttgaagaaaatcctttccaaggaaaacctgatt
caagatgttttgagcagtgtaaacgcaaccgaaatggcgcgacggaaatttcgggatatc
gccgtcatttcaggaatggtggttcagaattatcccggtttgcaaaaaaacaataaaagt
ttgcaggcaagttcgggtttgattttcaatgttttggaagattacaatcctgaaaattta
ttgctgaagcaagcctataccgaagttttcaaccaacaaatcgacgaacaccgtttgatg
gaagcgtttaaaagaatcgagaattctaaaattattctgaaatttgcgaatgcgttcaca
ccgttaagtttcccgataaaagtcgatagcctaagacaaagtttgtcgagcgaagattta
gacgcaagaattttgcggttgcaaaatgagtcgatgaaaaaaaacaaaaaacgataa

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