Candidatus Kaistella beijingensis: J4771_12575
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Entry
J4771_12575 CDS
T07870
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe03030
DNA replication
kbe03430
Mismatch repair
kbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4771_12575
03430 Mismatch repair
J4771_12575
03440 Homologous recombination
J4771_12575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbe03032
]
J4771_12575
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_12575
Enzymes [BR:
kbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4771_12575
DNA replication proteins [BR:
kbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4771_12575
DNA repair and recombination proteins [BR:
kbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4771_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
UBB89669
LinkDB
All DBs
Position
complement(2699713..2700477)
Genome browser
AA seq
254 aa
AA seq
DB search
MNIKLHKPLCIFDLETTGTNVAKDRIVEICILKVNPDSSRESKTWLVNPEMYIPKESSAV
HGIYDEDVKDAPKFKEIAPKIMEMISGSDLGGFNSNRFDVPLLAEELLRAGIDFDLSKFK
LVDAQTIFHKMEPRNLTAAYNFYCGKSLENAHSAEADVLATFEVLDAQVGHYEDLPKDIA
GLSEFSFHNKFADLAGFIAFDEDEKEIFTFGKYKGQRVKDVFQKDLGYFGWIQNADFPLY
TKKVLTGIQLKSKF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaattacataaaccactctgcatcttcgatttagaaaccacaggaaccaac
gtcgctaaagatagaattgttgaaatctgcatcttaaaagtcaatcccgattcgtcccgt
gaaagcaaaacttggctggtaaatcctgaaatgtatatcccaaaagaatcaagcgccgtt
catggaatttatgatgaagacgttaaagacgctccgaaattcaaagaaattgccccaaaa
attatggaaatgatttcgggaagcgatttgggcggattcaattccaaccgttttgacgtg
ccacttttggcggaagaattattgagagcaggaattgattttgatttgagcaaattcaaa
ttagtcgatgcacaaacgattttccataaaatggaaccgagaaatttgactgccgcctac
aacttttattgcggaaaatctttggaaaatgcccattctgcggaagctgatgttttggcg
actttcgaggttttggatgcgcaagttggtcattatgaagaccttccaaaagatattgca
ggtttgagcgaattttcatttcacaataaatttgctgatttggcaggattcattgcattt
gacgaagatgaaaaggaaattttcactttcgggaaatataaaggacaacgagtgaaagac
gttttccaaaaagatttgggatattttggatggattcagaatgctgattttccgctttac
acgaagaaggttttgacgggaattcagttgaagtccaagttctaa
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