Candidatus Kaistella beijingensis: J4771_12925
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Entry
J4771_12925 CDS
T07870
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe03420
Nucleotide excision repair
kbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4771_12925
03430 Mismatch repair
J4771_12925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_12925
Enzymes [BR:
kbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4771_12925
DNA repair and recombination proteins [BR:
kbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4771_12925
MMR (mismatch excision repair)
Other MMR factors
J4771_12925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
EAD8
DEAD
Motif
Other DBs
NCBI-ProteinID:
UBB89733
LinkDB
All DBs
Position
2773296..2775641
Genome browser
AA seq
781 aa
AA seq
DB search
MMDYLKGLNEAQYEAVTTLEGPLMVLAGAGSGKTRVLTMRIAHLITNLVDPFNILALTFT
NKAAKEMKERIAKVVGASEAKSLWMGTFHSVFARILRSEAQYLGFPSNFTIYDSQDSLNV
IKKVLKELNIDADLYKPKKVQARISTYKNNLITVKAYFNNPELIEADERANMKHIGLIYQ
KYVEACFKNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAANV
VIAKNVQQFKKNVFSDNEEGEKIKVYRSLSDADEANFVASNIWELHNSNQRKFTDFAILY
RTNSQTRAFEDALRRKNIPYRVYGGLSFYQRKEVKDLIAYLRLLVNENDSEALFRIINYP
ARGIGETTQNKLIVFADSQNVSVAQVLNNLGFYAPQLGLNNGVLTKLSDFWSMIKAFQVL
LKTENVYNVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQQQLEDGDP
SLSNFLENIALSADTQKDKEDDNTDKVSLMTIHLSKGLEFPIVHLVGLEENLFPSFMSSS
TREELEEERRLFYVALTRAEKQAFFTYAVSRFQWGKITDAEPSRFLSEVDSQYLEFINPA
IESRFVNHSGLKSNIFDDGPSEPRFFKKVEPKKTLKRDVDAGEAKQPPQNLKPVATAKII
NPSGQSSQDIEVGDKVRHDRFGVGEVTFLDGTDPQNIKAKVVFQHEGEKNLILKFAKLTK
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatggattatttgaaaggattaaatgaagcacagtacgaagcagttaccacacttgaa
ggacctttgatggttcttgcaggtgcgggttccggaaagacacgcgttctcacgatgcgc
attgctcatttgatcaccaatttggtggaccctttcaatattttagccttgacttttacc
aacaaagccgctaaagaaatgaaggaacgtatcgcgaaagtcgttggtgcaagtgaagcc
aaatcactttggatgggaactttccactcggtttttgccaggattttaagaagtgaggcg
cagtatctcggatttccctccaactttacgatttacgattcgcaggattctttgaatgtc
attaaaaaagttttgaaagaactcaacatcgatgcggatttatataaacctaaaaaagtt
caggcgagaatttcgacgtacaaaaataatttgatcaccgttaaagcctacttcaacaac
cccgaattaatcgaggcggacgaacgtgcgaacatgaaacacatcggtttgatttaccaa
aaatatgtagaggcctgctttaaaaacggagcgatggattttgatgatttgttgttgaga
accaatgaattgctgactcgctttcccgaagttttagcgaaatatcaagaccgattccga
tatattttggtggatgagtatcaagatacgaatcactcgcaatatctgattgtaaaagct
ttggcttcaaaatttgaaaatatttgtgtggtgggagacgatgcgcaatcgatttactcg
ttccgtggtgcaaatatttacaatattttaaatttcaaaaaagattatcccgacgcagtt
accgtatcattggagcaaaattatcgttccacgcaaaacattgtgaatgcggcgaatgtg
gtgattgctaaaaacgttcagcaattcaaaaaaaatgttttttccgacaacgaagaaggt
gaaaaaataaaagtttaccgctccctttccgatgcggatgaggcgaatttcgtggcttcc
aatatttgggaacttcacaattccaatcaaagaaaatttacagattttgcgattttgtac
cgaacgaattcccaaacccgtgcttttgaagatgcgctccgaagaaagaatattccgtac
cgagtttacgggggattgtctttctaccaaaggaaagaagtgaaagatttaatcgcttat
ctgcgacttttggtgaatgaaaacgacagtgaagcgttgttccgaatcatcaattatccc
gcccgtggaattggtgaaacgacacaaaataaactgattgtttttgcggattctcaaaat
gtttcggtggcacaagtcttgaataatctcggattttacgctccacaattaggtttaaat
aacggagttttaacgaaactttccgacttttggtcaatgattaaagcgtttcaggtttta
ctaaaaactgaaaacgtgtacaatgtcgccatggaagtcgccaaacgcagcggattgata
aaatttttgaaagacgaccaaactcccgaaggaatttcccgtgtggaaaacgtgcaggaa
ttgatgaactcgatgcagggtttcattgaggaacagcagcaactggaagacggcgatcca
agcttgtcgaatttccttgaaaacatcgcgctctccgcagatacgcaaaaagacaaagaa
gatgacaatactgataaagtttctttgatgaccattcacctttccaaaggtttggaattt
cccattgtgcatttggtgggacttgaggagaatttatttccaagttttatgagttcatcc
actcgtgaagagttggaagaagaacgtcgattattttatgtggctttaacaagagctgaa
aaacaggcatttttcacttacgccgtttcccgttttcagtggggaaaaatcaccgatgca
gaaccttcaagatttttaagcgaagtcgattcccaatatttagaattcatcaatcctgcg
atagaaagccgtttcgtaaatcattcaggtttaaaatccaatatttttgacgacggtcct
agcgaaccgagattctttaaaaaagtcgaaccgaagaaaactttaaaacgcgatgtcgat
gcgggcgaagcgaagcaacctcctcaaaacctaaaacctgtcgccaccgcaaaaatcatc
aatccgagcggacaaagttcacaggacatcgaagtgggcgacaaagttcgtcacgaccgt
ttcggcgttggagaagtgactttcctcgatggaaccgacccgcaaaacatcaaggcaaaa
gtggttttccaacatgaaggcgagaaaaatttgattttgaagtttgcgaaactgaccaag
atttag
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