Kwoniella bestiolae: 30205845
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Entry
30205845 CDS
T10967
Symbol
I302_102753
Name
(RefSeq) uncharacterized protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
kbi Kwoniella bestiolae
Pathway
kbi03013
Nucleocytoplasmic transport
kbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
30205845 (I302_102753)
03015 mRNA surveillance pathway
30205845 (I302_102753)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbi03019
]
30205845 (I302_102753)
Enzymes [BR:
kbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
30205845 (I302_102753)
5.6.2.5 RNA 5'-3' helicase
30205845 (I302_102753)
Messenger RNA biogenesis [BR:
kbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
30205845 (I302_102753)
mRNA cycle factors
Common to processing body (P body) and stress granule
30205845 (I302_102753)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
SLFN-g3_helicase
Viral_helicase1
DEAD
NPHP3_N
AAA_22
Helicase_RecD
Ribosomal_S13_N
nSTAND3
PhoH
AAA_16
AAA_25
T2SSE
ATPase
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
30205845
NCBI-ProteinID:
XP_019051003
UniProt:
A0A1B9GFU5
LinkDB
All DBs
Position
1:complement(join(7331068..7331501,7331563..7331740,7331809..7332518,7332579..7333188,7333242..7333408,7333471..7333805,7333863..7334117,7334186..7334267,7334329..7334467,7334533..7334569,7334677..7334894,7335002..7335034))
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AA seq
1065 aa
AA seq
DB search
MEFSNFEGASQYGPQDDDLTSVYSAVPNSVLDGGHTHNHAPSTINGDFASQFNDMGISDP
RYGDEEFEEREREMLGVGVEHACAYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIVNHL
VKAKHKEVVLHKESALGDTVPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAALTNSR
DINWDTSQWSAIIDDRQFLSWLVKIPSEAEQLRARQISLAQISKLEELWRDNPDARLEDA
EAQSGEEEMQPILLRYEDAYQYQNIFGPLVKIEADYDKRMKESQTENDITIRWDMGLNQK
RLAWFCMPKLESGEVRLAVGDELRLKFVGTTSAGIKGMQAFSSKGWGGGGSSEGWEGIGS
VIKIPNNVSDEICLELRRNDGVPSDCTHGFSVDFVWKATSFDRMQAAMKTFAIDEKSVSG
YIYHKLLGHELEPQVLRTQMPKRFSAPNLPELNHSQMAAVKAVLQKPLSLIQGPPGTGKT
VTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRIAAKSREALASNVDFL
SLHSQVNNADTHPELQKLIQLRNDQGELSQSDERKYKSLVRACEKDILNAADVICTTCVG
AGDQRLSKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAG
LSQSLFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPW
PVGDTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPSQIGVITPYEGQ
RSYIAAYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRL
NVALTRAKYGVVILGNPKVLSKHPLWLYLLTHYKEKSCFVEGPLSNLQPSMMQFSRPKKS
LAAAMDPFKRRESPAGEYMDKNIGRVPGPAAGRFDPSYYRTHNTLSFVPSDSQSVISQAI
TNSAFPLFPPGGSKPKTYTGYASSVISQQPTDSGIPTNGNSKGNLTPGIGGIGYSQFDRL
GGGKRRGSFGSEAASASMYAYGYKGGDGEDDNMSVAPSQAGMTEF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggaattctcaaatttcgagggagcttcacagtacggcccgcaagacgatgatctcacg
tctgtctattcagcggtacccaactctgtccttgacggtggtcatacccacaaccatgcg
ccctctacgataaacggcgatttcgcgagtcagttcaatgatatgggtatatcggatccg
aggtacggtgacgaggagttcgaggagagggagagggagatgcttggtgtaggggttgaa
catgcttgcgcctactgcggtatacataaccctcaatgtgtagtcaagtgcctacattgc
aataaatggttctgcaattctcgaggaaacacctcggcatcacatatagtcaatcacctg
gtcaaagccaaacataaggaagtagtcttacacaaggagagtgctctaggtgataccgta
ccagaatgctacaattgtggaagtaagaacgttttcatgttggggttcattcctgcgaag
agtgatactgttgtcgtgcttctttgtcgacaaccctgtgcggccttgaccaattcaaga
gatatcaattgggatacatcacagtggtcagccatcatcgacgatagacaattcttatct
tggcttgttaaaatcccctctgaagccgaacaactaagagcgaggcagatctctctagct
cagatttccaagttggaggaactgtggagagataatccggatgctagattggaggatgcc
gaggctcaatcaggggaagaggagatgcaacctattttactcagatacgaagatgcctat
caataccaaaacattttcggaccgctcgtgaagatagaagcagattacgataaacgaatg
aaggaatcgcaaactgaaaatgacatcaccataagatgggatatgggtttgaatcaaaaa
cgactagcgtggttctgtatgcccaaattggaatcgggagaagtgaggttagctgttggt
gatgaattgagattgaaatttgttggaaccacttctgctggaattaagggaatgcaggcc
tttagttcgaaaggttggggtggaggtggtagtagtgaaggatgggagggtattggcagt
gttatcaaaattcctaacaacgtctccgatgagatttgcttggaattgagacgaaacgat
ggggtaccttccgattgtactcatggcttctctgttgatttcgtatggaaagctacaagt
ttcgataggatgcaagctgccatgaagactttcgctatcgacgagaagagcgttagcgga
tacatataccacaaactcctcggtcacgagctcgaacctcaagttttacgaactcaaatg
cccaaaagattctcggcgcccaacctacccgaactgaatcactctcaaatggctgccgtc
aaggctgtcctgcaaaaaccactcagtctgatccaaggtcctcccggtactggtaaaaca
gtcacttcggcatcgatcgtttaccacttggccaagatgaaccccggtcaagtcttggtc
tgcgcaccatcgaacgtcgctgtcgaccatctatgtgagaagatccatcaaactggcttg
aaggtcgttcgaatcgctgccaaatcacgagaagcactcgcatcaaatgtggacttccta
tcactccacagccaggtcaacaatgccgatacacatcctgaactacagaagcttattcaa
ctcaggaacgatcaaggtgaattgagtcagagtgatgagaggaaatataagagtttggtc
agagcgtgcgagaaggatattctcaatgctgcggacgtcatctgtacgacttgtgttggt
gctggtgatcagagattaagcaagttcaagtttaggactgtcttgatagacgaagctact
cagtcagcggaaccagaatgtatgatccccctcgtcatgggatgtaagcaagctgttctc
gtcggtgatcaccaacagcttggtccagtcatcatgaacaagaaagccgcaagagctggt
ctatcccaatctttattcgaaagattagtcatcttgggtaatcgaccaattcgacttcaa
gtgcaatatcgaatgcacccttgtctatctgagttcccatccaacatgttctacgaaggt
accctacagaatggtgtcactgcacctgaaagacttagaaagaacgtcgatttcccatgg
ccagtcggcgatacgcctatgttcttccatcagaatctcggtacggaggagatatcatct
agtggtacttccttcttgaatcgaactgaagcctcaaacgtcgagaagatggtcacgaaa
ttcttcaaatcgggtgtccttccctcccaaataggtgtgatcactccttatgaaggtcaa
cgatcgtacatcgcagcgtatatgcaattgcatggaagtctcaagaaagacttgtacaag
gaagtggaagttgcgtcggtggatgctttccaaggtcgagagaaggattatatcatcctg
agttgtgtgagatcaaacgaacatcaaggtatcggtttcttgaatgatcctaggaggttg
aacgtagctttgactagagctaagtatggagtggtcattctgggtaatccaaaggtattg
agcaagcatcccctttggttataccttctcacccactacaaggagaaatcatgtttcgtc
gaagggcctctgagcaaccttcaaccaagtatgatgcaattctcaagacctaagaaatct
ctggcggctgctatggacccattcaagagacgtgaaagtccagcaggagagtacatggat
aagaacatcggcagagtacccggaccagccgctggccgcttcgatccatcatactaccga
acccacaatactctctccttcgtcccatccgactctcaatcagtaatttcccaagcaatc
accaactccgctttccccctattcccaccgggcggatctaaacccaagacatatactgga
tacgcctcctcagtcatctcccaacaacccaccgattcgggaatacctaccaatggaaat
tccaaggggaacctcacgcctggaataggtgggatcggatactctcagttcgataggctg
ggaggagggaagaggaggggaagtttcgggagcgaagctgccagtgcgtctatgtatgct
tatgggtataagggcggggatggcgaggacgataatatgagtgtggcgcctagtcaagct
gggatgacagagttttag
DBGET
integrated database retrieval system
