Kwoniella bestiolae: 30206076
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Entry
30206076 CDS
T10967
Symbol
I302_102981
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
kbi Kwoniella bestiolae
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbi03019
]
30206076 (I302_102981)
03041 Spliceosome [BR:
kbi03041
]
30206076 (I302_102981)
03036 Chromosome and associated proteins [BR:
kbi03036
]
30206076 (I302_102981)
Enzymes [BR:
kbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
30206076 (I302_102981)
Messenger RNA biogenesis [BR:
kbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
30206076 (I302_102981)
mRNA cycle factors
Common to processing body (P body) and stress granule
30206076 (I302_102981)
Spliceosome [BR:
kbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
30206076 (I302_102981)
Chromosome and associated proteins [BR:
kbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
30206076 (I302_102981)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
ResIII
Utp25_C
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
30206076
NCBI-ProteinID:
XP_019051228
UniProt:
A0A1B9GGR3
LinkDB
All DBs
Position
1:complement(join(7959611..7961119,7961187..7961590,7961684..7961735))
Genome browser
AA seq
654 aa
AA seq
DB search
MTTGPVNGLQGLEAKFNSGMKLNPERPAYVPPHMRQRGPPGPGPQFNNAPAPAGPGYHQS
PTGLPTPATTPPQSRGSYAPPAARGGAFPPSGGPRADDGGWGAPRRGPAEPRSFGGGAPG
FGSWKNGEHITGARNPRLEKELFGEVGDGVHQSTGINFDKYADIPVEATGTGVPEPVTEF
TNPPIDPVLLENIQFARYTTPTPVQKYSLPIVAGGRDLMACAQTGSGKTGGFLFPILSAM
FTYGPIAPPADNSYGGGYNNRRKAYPTALVLAPTRELVSQIHDEARKFAYRSWARPAVVY
GGADIGQQIRALDRGCDLLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQI
RQIVEGEDMPGVMDRQTLMFSATFPKEIQMLARSFLKDYIFLSVGRVGSTSENITQRIEY
VDDADKRSLLLDLLLAEQSGGLILVFVETKRMADSLCDFLQMQRHNATSIHGDRTQRERE
YALHAFRTGKAPILVATAVAARGLDIPNVTHVILYDLPTDVAEYTHRIGRTGRAGNTGTS
TAFFNRQNLNISRELIDLLKEANQVVPQWLIDVSSERSFGGYGGRGGRGRGGGGGGRMGG
RDVRQGGGGFGGGASRGGGNSYGGGGYGGGYGGYGGGGGGGFPPPAASGGASWW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacaactggtcctgttaatggtttacaaggcctcgaggccaaattcaacagcggtatg
aagcttaaccccgaacgacccgcttacgttccccctcacatgagacaacgaggacctcct
ggcccaggacctcaattcaacaacgctcctgctcccgctggtccgggctatcaccaatcc
cccactggacttcccactccagccactacccctcctcaatcgcgaggatcttatgctccc
cccgctgctcgaggtggtgctttccctccttcaggtgggcccagagccgacgacggtggt
tggggcgcacctagaagaggtcctgccgaacctagatctttcggtggtggtgctcccgga
ttcggaagttggaagaacggtgaacatatcaccggtgctagaaaccctagattagagaag
gaattgttcggtgaagttggtgatggtgttcatcaatccactggtatcaacttcgacaaa
tacgccgacatccccgttgaagctaccggtactggtgtccccgaacccgttaccgaattt
accaacccacctatcgaccctgtccttctcgagaacattcaattcgctcgatacaccacc
cctactcccgtccagaaatactcactccccatcgttgctggtggtcgagatttgatggcc
tgtgctcaaaccggttccggaaagactggtggtttcctcttccctatcctctcagccatg
ttcacctacggtcctatcgctccccctgccgacaacagctacggaggtggatacaacaac
cgaagaaaggcttaccccaccgctcttgtactcgcccctacccgagagttggtctcccaa
atccacgatgaagccagaaaattcgcttacagatcttgggctcgacctgccgtcgtatac
ggtggtgccgatattggtcaacaaatccgagctctcgaccgaggatgtgatcttctctct
gctacccctggtcgacttgtcgacttgattgagagaggtaaaatctctcttgccaacgtc
aagtacctcgtccttgatgaagccgatcgaatgctcgatatgggtttcgaacctcaaatc
agacagatcgtcgaaggtgaagatatgcccggagtcatggacagacaaactctcatgttc
tccgctactttccccaaggagattcaaatgctcgctcgatctttcctcaaagattacatc
ttcctttccgttggtcgagtcggttccacctccgagaacatcacacaacgaatcgaatac
gtcgatgatgccgacaagcgatcattacttctcgacttattgcttgctgagcaatctggc
ggtttgatcttggtcttcgtcgagaccaagcgaatggccgattccttgtgtgatttcctc
caaatgcaacgacacaacgccacatccattcacggtgaccgaactcaacgagaacgagaa
tacgctctccacgctttcagaactggtaaagcacctatcctcgttgctactgctgttgct
gctcgaggtttggatatccccaacgtcacccacgtcatcctctacgaccttcctaccgat
gttgccgagtacacccaccgaatcggtcgaactggtcgagcaggtaacaccggtacttcc
actgccttcttcaacagacagaacttgaacatctcccgagaattgatcgatctcctcaag
gaagccaaccaagtcgttcctcaatggctcattgatgtcagctctgaacgatccttcggt
ggatatggaggacgaggtggtcgaggacgaggtggtggtggtggaggacgaatgggcgga
cgagatgtcagacaaggtggcggtggattcggtggtggtgcctcccgaggcggtggtaac
agctacggtggtggtggctatggaggtggctacggcggttacggcggtggtggtggtggt
ggtttcccccctcctgctgcctctggcggtgccagttggtggtaa
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