KEGG   Kwoniella bestiolae: 30206420
Entry
30206420          CDS       T10967                                 
Symbol
I302_103318
Name
(RefSeq) pre-mRNA-splicing factor RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
kbi  Kwoniella bestiolae
Pathway
kbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    30206420 (I302_103318)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kbi03021]
    30206420 (I302_103318)
   03041 Spliceosome [BR:kbi03041]
    30206420 (I302_103318)
   03036 Chromosome and associated proteins [BR:kbi03036]
    30206420 (I302_103318)
Transcription machinery [BR:kbi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     30206420 (I302_103318)
Spliceosome [BR:kbi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    30206420 (I302_103318)
 Complex B
    30206420 (I302_103318)
 Complex C
   U2 SnRNP specific factors
    30206420 (I302_103318)
Chromosome and associated proteins [BR:kbi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     30206420 (I302_103318)
    TFTC complex
     30206420 (I302_103318)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 30206420
NCBI-ProteinID: XP_065725720
UniProt: A0AAJ8K5T8
LinkDB
Position
2:join(477810..477960,478066..478088,478158..478212,478322..478436,478513..478575,478704..478818,478875..478967,479021..479114,479173..479375,479431..479609,479673..480031,480091..480503,480557..480634,480686..481062,481120..481408,481524..481730,481798..481923,481992..482480,482556..482774)
AA seq 1215 aa
MHLLNLTLQAPSNITSAVVGSFSGTKGQEILAVRGGTKLEILKLNTSTGQLDTICSTEAF
GTVRNVVGFRLAGMTKDYILASSDSGRLSIIEFVVAPTPHFESLYQEVYGKSGSRRVVPG
QYLAVDPKGRSCLVGASKLVYVLNRNSEGKLFPSSPLEAHRNHNLVTHIVGVDQGYDNPL
YAALEMDYSESDEDPTGEAYENVQKYLTFYELDLGLNHVVRKWSEPTDRRANLLVQVPGG
QNASSDRFDGPSGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLAQRGEKSRGLIIVAAVM
HKIKGAFFFLLQSEDGDLYKVWIEHEGEDVRALKIKYFDTVPVANSLCILKSGYLFVASE
FSDQNLYQFQALGDDDGEQEWSSTDYPDNGNIEGPLPYAFFNPRPLQNLLQVDTLSSLDP
ITDASVVNLLGPGSDTPQIYAACGRGPRSTFRTLKHGLDVSVLVSSPLPGVPTNVWTLKL
TEEDEHDSYIVLSFPNGTLVLSIGATIEEVNDTGFLSSGPTLAVQQLGEAGLLQVHPYGL
RHIRGADRVDEWPAPPGQTIVAATTNKRQVVIALSTAELVYFELDPEGSLSEYQDKKSLP
GNATCLSIAEVPEGRRRTPFLAVGCDNQTVSVISLEPDSTLTTLSLQALTAPPSSICLAE
IFDTSIDKNRATMFLNIGLANGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRSTIHGQP
SVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWNLSAAMCPDGLIGISGNTLRIFTIPKL
GEKLKQDVLPLSYTPRKFVSHPYNTVFYMIESDHRTYSPTAIDRIVREKEANGSRVDTSL
LSLPPNEFGRPRAAAGHWASLLRVLDPLTNESIATFDLDEDEAAFSMTIAYFERGGGEPF
LVVGTGVKTTLAPKSCQEGWLRVYAIKEQGRVLEFMHKTKTDDVPLCLAAFQGFLLAGVG
KSLRLYEMGKKALLRKCENNSFPTGVATINVQGARIIVGDMQESTFYCVYRSVPTRQLLV
FADDTQPRWLTCVTEVDYETIVCGDKFGNIFLNRLDSRTSETVDDDPTGATILHEKSFLM
GAAHKTELLAHYNVGSIVTSITKIPLVAGGRDVLVYTTVSGSVGALIPFVSMDDVEFMST
LEMHMRSQNVSLVGRDHLAYRGYYVPVKGVIDGDLCENFNLLPYSKQQAIAADLDERSVG
DVLKKLEQMRTSSAF
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgcacttgctcaacttgacgcttcaggctccatcgaatatcacctcagccgttgttggt
tctttctccggtacgaagggacaggagatactggctgttagaggtgggacaaagttggag
attttgaagttgaatacttctactggacagctggatacgatatgttcgacagaggctttt
ggaactgtcaggaatgtagtgggattcaggttagcggggatgacgaaagactacatcctg
gcgtcttcggattccggtagattatcaataatcgaattcgtagtcgccccaacaccgcac
tttgagagtctgtatcaggaagtatatgggaagtcagggagtcgacgagttgtacctgga
caatatctggctgtagacccaaaaggaagaagttgtctggtaggagcatcgaaattagta
tacgtattgaaccgaaattcagaaggcaaactattcccctcatcacctttagaagctcac
cgaaatcataacttagtaactcacatcgtcggcgtggatcagggttatgataacccactt
tacgctgcgttggagatggattattcggagagcgatgaagatccaactggagaggcatac
gagaatgtacaaaagtacttgacattctacgaactcgatctgggtctgaatcacgtagtg
aggaaatggagtgaaccaacggatagaagggcaaatttgcttgttcaagtacccggtgga
cagaatgcaagttctgataggttcgatgggccttctggtgtattggtctgtacggaagat
cacataatatggaaacatatggacgtagaagcgcacagaatacctatacccagacgtagg
aacccattagctcagcggggagagaagagtagagggttgatcatcgtcgcagcggtgatg
cacaagatcaagggtgcattcttcttcctgctgcaatctgaagatggagatctgtacaaa
gtgtggatagaacatgaaggagaagatgtcagagcattgaagatcaagtacttcgataca
gttccagtggcgaacagtctgtgtatcttgaaaagtggttacctgttcgtagcgagcgag
ttcagtgatcagaatctataccagttccaagctttgggtgatgatgatggagagcaggaa
tggtcatcaacagattacccagataacggaaatatcgaaggaccattaccctatgccttc
ttcaaccctagacccctccagaacctccttcaagtcgatactctctcgtcactcgatcct
attaccgatgcgtcagtcgtcaacctcctgggaccaggttccgatacccctcagatctat
gctgcctgtggaagagggcctaggagtaccttcaggactctcaaacacggcttggacgtt
tccgtgttggtcagctcacctctgccgggtgtgcccaccaatgtctggacattgaagttg
actgaagaagatgaacacgactcgtatattgtcctttcattccctaacggtactcttgtc
ctctctatcggtgcaactatcgaagaagtcaacgatactgggttcctctcttccggacct
acactagcagtacagcagctcggtgaagcaggcttattgcaggtgcacccatatggtcta
agacatatcagaggagccgatagagtggatgaatggcccgccccgcctggtcagaccatc
gtcgctgctactaccaacaagcgacaggtggtcattgcgttgagcacagctgaactggtc
tacttcgagcttgaccctgagggttcattgagtgaataccaagataagaagtcgttgcct
ggcaatgccacttgcttgagtattgctgaggtaccagaaggaaggaggcgaacgcctttc
ttggctgttggatgtgacaaccagaccgtttcagtcatatctctcgagccagatagtacc
cttaccaccttatctttacaagctctgacagccccaccatcttccatctgtctcgccgag
atcttcgacacttccatcgacaagaaccgagcgacaatgttcctgaacataggtttagcc
aacggtgtgcttctaaggacagtggtagatcctgtagacggatcattgtcggatactcga
ttacgattcttgggtgcgaaaccacctaaattggtcagatcaactatacatggtcaaccc
tcagtcatggccttctcaagtcgaacgtggttgttatacacatatcaagatatgctacag
actcagccattgatctacgatacactcgagtacgcctggaatctgtcggccgctatgtgt
cctgatgggttgattggtatttccggcaataccttgaggatattcacgatacccaaacta
ggtgaaaagctcaaacaagacgtactacccttatcctacactccacgaaaattcgtcagt
cacccatacaacactgtattctacatgatagaatcggaccaccggacctactctccaacg
gctattgataggatcgtcagagagaaggaagcgaatggcagtcgggttgatacttcgttg
ttatccttgccgcccaatgagtttggtaggcctcgagctgcagctggtcattgggcgtcg
ttattgagggtgttggatcctttgactaacgaatctatagcaacgtttgatttggacgaa
gatgaggctgctttctcaatgaccatagcgtacttcgaacgaggtggaggagaaccattc
cttgttgttggaaccggtgtcaagacgacccttgcacctaaaagctgtcaagaaggttgg
ttgagggtgtatgctatcaaggaacaggggagagtattggagttcatgcacaagaccaaa
accgacgatgtaccgctatgtctcgctgctttccaaggtttcttacttgctggtgtaggc
aaatcgttgaggctgtatgagatgggtaaaaaggcattattgcgaaaatgcgagaacaac
tctttccccactggcgtagcgaccatcaacgtgcaaggtgcgcgaataatagtaggagac
atgcaagaatcgacattctactgtgtatatcgatctgtgcctactcgacagttattggtg
tttgccgatgatacccaacctaggtggttgacctgcgtgacagaggtggattacgaaacg
atagtgtgtggtgataaattcggaaacatcttcttaaatcgactagattcaaggacatcg
gagactgtggatgatgatccaaccggagcgacaatcttacatgagaagtcgtttttgatg
ggtgcagcgcacaagacggagttgctcgctcactataacgttggtagtattgttacctcc
attaccaagatacctttagtagctggtgggagggacgttctggtgtataccaccgtatct
ggatcagtgggcgcattgatcccattcgtcagtatggatgatgtggagtttatgagtact
ttggagatgcacatgaggtcccaaaatgtctcattggtaggacgtgatcacctggcctac
aggggctattacgtcccagtcaagggagtgatcgatggagatctatgtgaaaatttcaat
ctgttaccttatagtaaacagcaggctatcgctgctgatctcgatgagaggagtgtagga
gatgtgttgaagaagttggaacagatgagaacgagtagtgctttctag

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