Kwoniella bestiolae: 30207445
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Entry
30207445 CDS
T10967
Symbol
I302_104338
Name
(RefSeq) uncharacterized protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
kbi Kwoniella bestiolae
Pathway
kbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30207445 (I302_104338)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kbi03041
]
30207445 (I302_104338)
Enzymes [BR:
kbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
30207445 (I302_104338)
Spliceosome [BR:
kbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
30207445 (I302_104338)
Complex C
U4/U6.U5 tri-SnRNP related factors
30207445 (I302_104338)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_19
AAA_22
PWI
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
30207445
NCBI-ProteinID:
XP_065725920
UniProt:
A0AAJ8M8K4
LinkDB
All DBs
Position
2:join(3178215..3178253,3178311..3179508,3179566..3180011,3180066..3180168,3180220..3181022,3181100..3181435,3181522..3181708,3181847..3181959)
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AA seq
1074 aa
AA seq
DB search
MDLKTFISDNVVRILGSSDNATVDYVHSLALSSKTPGDLYHALLATGLSDSSDTQSFATQ
VHALVPRKTKSKVPKAEKAAPSQRFALLMDEDEGASSSSSSKKEKKSKKGKEKEKDRDGG
AVKLGRSARKRDTEGNWESDEEEKEKEAKRLRLNSPSGARSEEPEVQETEEERLERERLE
DLAERDAFAERMKAKDKDRTKKLVTDRSTKLGSGGLEAEKRSALENDPESRKAAIEDLRL
HSRQEYLTKREQQRLDLLKMEIEDEKILFRNQKMSKRELAEFERKKELIKIMEARQKIDD
GTDGYMMPDDYITEQGRIDQKKKKNALYQRYEDSKPVEGQFVTDVDQWEYSQTDKSSLKT
GAMDKEVIVEEFDYVFDESQKIKFIQEGQYGGEGISLEAQNLLDQVNQLEKKAQSIQETR
QSLPIYEYRDELLEAIAEHQVLIVVAETGSGKTTQLPQYLYEAGYCKNGMKVGCTQPRRV
AAMSVAARVAEEMGCRLGQEVGYSIRFEDMTSDKTALKYMTDGMLLREFLTDPELSTYSA
LVIDEAHERTLSTDILFGLIKDIARFRPELRLLISSATLNAQKFADFFDQAPIFDVPGRR
YPVDMFYTKQPEANYMHAAVTTILQIHTTQPKGDILLFLTGQDEIEAAEENLKETMYALG
DKVAELIIAPIYANLPSEMQSKIFEPTPEKARKVVLATNIAETSITIDGVVYVIDPGFVK
QNNYNPKTGMSSLVVEPISRASANQRAGRAGRVGAGKAFRLYTKWAFKNELLEDTIPEIQ
RTNLATVVLMLKSLGINDVLNFDFLDKPPAETIIRSFELLYALGALNHKGELTRMGRRMA
EFPVDPMLSKAIINSENYKCTHEVLTIISMLQESGSLLYRPKDKRVHADKAHKNFIKPGG
DHFTLLNIFEQWSEAGYSQQWCYENFIQFKSLGRVRDIRDQLAQLCDRVEVVIESTPNEI
VPVQKAITAGYFYNTARIDKGGGYRTTKNNHSVYVHPSSCLIGMQPPPRFILYYELVLTS
KEYMRQCMPIEGSWLAELAPHYFNKNEIDQMLGSASKVKMPKAIEQPKVGPVNP
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaagacattcataagtgacaatgtcgtccgaatcctcggctcatcagacaac
gcaacagtggactacgtgcactctctcgccctctcctccaaaacaccaggcgacttgtat
catgccctgctcgctaccggtctatccgactcctccgacactcaatcctttgccacccaa
gtccacgctctcgtacctcgaaagaccaaatccaaagtacccaaagccgagaaggcagct
ccatctcagcggttcgcactgctaatggatgaggacgaaggcgcttcatcgagcagctca
agcaagaaggagaagaagtctaagaaaggtaaagagaaggagaaagatagggatggcgga
gcagtcaaactcggtagatcagctaggaagagggacacagagggtaattgggagtccgat
gaggaagagaaggagaaagaagccaagaggttgaggttgaatagtccctccggtgcaagg
agcgaggagccagaggtgcaggaaacggaagaagaacggctggaacgggagaggttggaa
gatctagctgagagggatgcctttgcggagaggatgaaggctaaagataaagatcggact
aagaaattggtcacggaccgatcgacgaaattgggcagtggggggttagaagctgagaaa
cgatctgctctggagaatgatccagaaagtaggaaagctgctattgaagatttacgtcta
cactcgaggcaggaatatctcactaagagagaacaacagaggttggatctcttgaaaatg
gagatagaagatgagaagatattgtttaggaatcagaagatgtcgaagagagaattagca
gaatttgagcgaaagaaagagttgatcaagattatggaagctagacagaagattgatgat
ggtaccgatgggtatatgatgcctgatgattatatcacggaacagggtaggatagatcag
aaaaagaagaagaacgccttgtatcagcgatacgaagattccaaacctgtcgaaggacag
ttcgtcacggatgtggatcagtgggagtatagtcagacggataaatctagcttgaagact
ggggcgatggataaggaggtgatagtggaagagttcgattacgtctttgacgagtcgcag
aagatcaagtttatccaggagggccagtatggaggtgaaggtatttcgttagaagctcag
aatcttctggatcaagtgaatcagctggaaaagaaggcccaatccatacaagagactcga
caatcattacctatctacgaataccgagatgaactcctcgaagctatagcagaacatcaa
gtcctgattgtggtggccgaaacgggatcaggtaaaaccactcaattacctcaatacctg
tacgaagctggatactgcaagaacgggatgaaagtgggatgtactcagcctcgtcgtgtg
gccgctatgtcagttgcggctcgtgtagctgaagagatgggctgtaggttgggtcaagaa
gttggatattcaattagattcgaagatatgacgagtgataagaccgctctcaagtatatg
acggacggtatgttgttgagagagttcttgacggatccggaattatcaacgtactctgct
ttggtgattgatgaagcgcacgagagaacgctgagtacggatatactgtttggtctgatc
aaagatatcgcccgattccgaccagagttacgacttttgatttcaagtgctacgttgaat
gcccaaaagtttgcggacttctttgatcaagcaccgatttttgatgttcccgggagacga
tacccagtcgatatgttctacaccaagcaacctgaagcgaactacatgcacgccgccgtg
acgactatcctccagatccacacgactcaacctaagggggacattctacttttcttgacc
ggtcaagatgagattgaagctgctgaagaaaacttgaaagaaacgatgtatgctttagga
gacaaagtggcagagttaatcatcgcaccgatctacgccaatctgccttcggagatgcag
tcgaagatcttcgaacctacacctgaaaaagcaagaaaagtggtcttagctaccaacatc
gccgaaacatccatcaccatcgatggggtagtatacgtgatcgatccaggatttgtcaaa
cagaacaactacaaccccaagaccgggatgtcgtcgttggtcgtcgaacctatctccagg
gcgtcggcgaaccaacgagcaggacgagcgggcagagtaggtgctggaaaagcgttcagg
ctgtataccaaatgggcattcaagaatgagttactggaagatacgatccccgaaattcaa
cgaacgaacttggcaacggtggtcttgatgttgaagtcattaggaataaacgatgtcctg
aatttcgatttcttggataaacctccggcggagactattataaggtcattcgagctcttg
tatgcccttggtgccttgaaccataaaggtgaactcaccaggatgggtcgaagaatggca
gagttccctgtggatccgatgttgtctaaggctattatcaatagtgagaattataaatgt
acccatgaggtactcacaataatatcgatgttacaagaatctggatctctactctaccga
ccgaaagataagagggtacatgccgataaagcccacaaaaactttatcaagcctggtggt
gatcatttcacgttactcaacatatttgaacaatggtctgaagcgggttattcgcaacaa
tggtgttatgagaatttcatacagttcaagtcattgggaagagtacgggatataagagat
caattggcacagttgtgcgatagggttgaggttgtgattgaatcgacaccgaatgagatt
gttccggtacagaaagctattacggcgggatacttctataatactgctcgaattgataaa
ggcggtggatatcgaacgaccaagaacaatcactcggtatatgtccatccctcatcttgt
ttgattggaatgcaacccccgccaagattcatattgtactatgagctcgtgttgacctcg
aaggaatacatgagacaatgtatgcctatcgagggatcttggttggctgaacttgcaccg
cattatttcaacaaaaacgaaattgatcagatgcttggtagcgcaagtaaagtgaagatg
ccaaaagctattgaacagcccaaagtgggacctgtgaatccgtaa
DBGET
integrated database retrieval system
