Kwoniella bestiolae: 30208532
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Entry
30208532 CDS
T10967
Symbol
I302_100760
Name
(RefSeq) uncharacterized protein
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
kbi Kwoniella bestiolae
Pathway
kbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
30208532 (I302_100760)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbi03019
]
30208532 (I302_100760)
03041 Spliceosome [BR:
kbi03041
]
30208532 (I302_100760)
03009 Ribosome biogenesis [BR:
kbi03009
]
30208532 (I302_100760)
03016 Transfer RNA biogenesis [BR:
kbi03016
]
30208532 (I302_100760)
Enzymes [BR:
kbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
30208532 (I302_100760)
Messenger RNA biogenesis [BR:
kbi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
30208532 (I302_100760)
Spliceosome [BR:
kbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
30208532 (I302_100760)
Complex C
U4/U6.U5 tri-SnRNP related factors
30208532 (I302_100760)
Ribosome biogenesis [BR:
kbi03009
]
Eukaryotic type
Pre-60S particles
Helicases
30208532 (I302_100760)
Transfer RNA biogenesis [BR:
kbi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
30208532 (I302_100760)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
30208532
NCBI-ProteinID:
XP_019047518
UniProt:
A0A1B9G622
LinkDB
All DBs
Position
1:complement(join(2028526..2028699,2028860..2029060,2029225..2029590,2029697..2030059,2030125..2030366,2030527..2030791,2031009..2031448,2031519..2031875,2032009..2032213,2032275..2032529,2032598..2033008))
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AA seq
1092 aa
AA seq
DB search
MAPKDPSSSAGPSTPREKKHRKRNVKERSAETSDRPVKSARIDEIDDVQEEEVEEDETAQ
AGGDAMDMLDSGVGSSSKTGDPMEVLEGQTENGQDVEGATVVKADEFETEAEREVEASKG
LDGAAAGEEGKMKLVHQVRHQVAVPPNYPYIPISQHKRNDPPAREYKFTLDPFQFVATSC
IERNESVLVSAHTSAGKTVVAEFAIATCLKEGRRVVYTSPIKALSNQKYREFLETFGDVG
LMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETI
ILLPHTVRYVFLSATIPNSMEFAEWITSTHEQPCHVVYTDFRPTPLQHYLFPAGSEGIYL
VVDERSNFREDNFQKAMAALAAGQGEDSADPNSGKGRKGNKTRKGGAMKGEKSDIYKIVT
LIMRRNLNPVIIFAFSKRECEDLAMQMQKFDFNTPDEASTVQQVFENAISGLSEDDKKLS
QIEGILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKALFATETFSIGLNMPAKTVVFT
SVRKFDGKDFRNLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPDAAKGMVKGQADRL
DSAFHLGYNMIINLMRVEGVSPEYMLERCFFQFQNSMSVPVLEKQLKEAEETRDAIIVEK
DDEISEYYDLRQQLKEKGQDFQAVISHPSYSLKFLQAGRLVEIKDGDKDFGWCVVVAYNK
VVNPKGRTPIFTESDPPQKQYIVDVLTKVASGTSSGNPKDRSSSTLIPPTGTDQGEVAII
ACSLTTVQAISQYRINLPKDLRGQSEKNTAFKAVGEIKKRMKDGPPLLDPIKSMGIEDKS
FKELVKKIAILEQRLSSLSITTSRDLPRLYDLYDKKQESINAVKQLKRKINSVHDILQLE
ELKSRKRVLRRLGFTTSDDVVEMKGRVACEISTGDELMLTEMMFGGTFNDLSPEQCAAVL
SCFVFQEKSEAKVRLKEELASPLRVLQETARRIAKISNESGIPIVEEEYIQSFKVEMMDA
VLQWCKGAKFSDICNLTDIFEGSIIRCFRRLQELIRQMGQAAHAIGNTELEEKFGKSMEL
LERPNTVVFNPS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaaagaccccagctcatccgctggaccatccacaccaagagagaagaaacac
agaaaacgaaatgtcaaagaacgaagtgctgagacgtccgatcgacccgtcaagtcagca
aggatagatgaaatcgatgatgtccaagaggaagaagtcgaagaagatgagacggctcaa
gcgggaggagatgctatggacatgttagattctggtgtaggatcatcatcgaagactgga
gatccgatggaagtgctggagggtcagacggaaaatggacaggatgtggaaggtgcgacg
gtggtcaaggctgatgaatttgagaccgaggctgagagggaggtggaagcttccaagggt
cttgatggagctgctgcgggtgaggaggggaagatgaagttggttcatcaggtccgtcat
caagttgccgtcccaccaaattacccatacatccctatttcccagcacaagcgaaatgac
ccaccagcaagagaatacaaattcaccttagatcctttccaattcgtcgctacgtcttgt
atagagcgtaatgagtctgtgctcgtatcggcacatacatcggcgggtaagacggtcgta
gctgagtttgcgattgcaacttgtctgaaggaaggaagaagagtagtatatacgagtccc
atcaaggcactgtctaatcagaaataccgagaattcttggaaacgtttggtgatgtggga
ttgatgactggagatgtcactatcaaccctaccgcttcgtgtttagttatgacaacggaa
attctgcgatcgatgttgtacagaggatcagaggtcatgagggaggtagcgtgggttgta
tttgatgaggtgcattatatgcgagacaaggaacgaggtgtcgtctgggaagagaccatc
atccttctccctcatacagtccgatatgtcttcctctcggctacgatccccaactccatg
gaattcgcagaatggataacgtcaacacacgagcagccatgtcatgtcgtatacacagat
ttccgtccaactccattgcaacactatctcttccccgccggatcagaaggtatctaccta
gtagtggatgagagaagtaatttcagagaagacaatttccagaaagccatggctgcgctg
gcagcgggacaaggggaagattctgccgatccgaatagtggaaagggcaggaaggggaat
aagaccaggaaaggtggagctatgaaaggtgaaaaatccgatatttacaagatcgtaacc
ctgatcatgcgaagaaacctcaaccctgtcatcatattcgccttctccaagagggaatgt
gaagatctggctatgcaaatgcagaaattcgatttcaatacccccgacgaagcttcgact
gttcaacaggtattcgaaaatgccattagcggcttatcagaggacgataagaagttatcc
cagatcgaagggatcctacccttactcaagaggggtattggaatccatcatggtggtttg
ttacctattttgaaagaggttattgagattttattccaggagggattgattaaagctctg
ttcgctactgagactttctcgattgggttgaacatgcctgcgaagactgttgtgtttact
agtgttaggaagtttgatgggaaagattttaggaatttgtctggtggtgaatacatccaa
atgtcaggtcgggccggacgaagaggtctcgatgcccgaggaatagtaatcatgatgtgt
gatgagaagatcgaaccggatgctgccaaagggatggtgaaaggtcaggcggacagattg
gattcggctttccatctcggttataatatgattatcaaccttatgagggttgagggtgtc
agtccggaatatatgttggagaggtgtttcttccagtttcagaatagcatgagtgtgcct
gttttggagaaacagctcaaagaagcagaagaaactagagatgccatcatagtagagaaa
gacgacgagataagcgagtattacgaccttcgacaacagctgaaagagaaaggccaagat
ttccaagctgtcatttcgcatccttcgtacagtttgaaattcttacaggctggtagattg
gtggagatcaaagatggcgataaggactttggatggtgtgtggtagtagcttataataag
gtggtcaaccctaaaggccgaacacccatattcaccgaatccgacccacctcaaaaacaa
tacatcgtcgatgtcctcaccaaagtcgcttcgggaacatcatctggaaatcccaaagat
cgatcttcctccactttgataccacctacaggaaccgatcaaggcgaagtagccatcata
gcttgttctctcactactgttcaggctatctcgcagtataggatcaacttgcccaaagat
ctcagaggacagtcggagaagaacacggcgttcaaagctgttggagagattaagaagcgt
atgaaagatgggccaccccttttggatcctattaagagtatggggattgaggataagagt
ttcaaggagttggtgaagaaaatcgcaatcctcgaacaacgactctcctctctatcaata
acaacctccagagaccttccgaggctgtacgacctctacgacaaaaagcaagaatccatc
aacgccgtcaaacagctcaagaggaaaataaactccgtacacgatatcctccagcttgaa
gagttgaaatcgcgtaagagggtgttgaggaggttgggattcacaacttccgatgatgtt
gtggagatgaaggggagggtggcgtgtgagatctcgacgggagatgagctgatgttgact
gagatgatgtttggggggacgtttaatgatttaagccctgagcagtgtgcggctgttttg
agttgttttgttttccaggagaagtccgaggccaaagtgcgtttgaaagaggaactagca
tctcccctccgagtacttcaggagacagccaggagaatagcgaagatctcaaacgaatct
ggtatacccattgtggaggaggagtatatccagagcttcaaggtggagatgatggatgcg
gttttgcagtggtgcaagggagccaagtttagtgatatctgtaatctcacagacatattc
gaaggatccatcatcagatgtttcaggagattacaggaactgatccgacagatgggtcag
gctgcgcacgctattggaaatacagagctggaagagaagtttgggaagagtatggagctg
ttggagagacccaatacagtggtgttcaacccttcgtga
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