Kwoniella bestiolae: 30209267
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Entry
30209267 CDS
T10967
Symbol
I302_105748
Name
(RefSeq) uncharacterized protein
KO
K12855
pre-mRNA-processing factor 6
Organism
kbi Kwoniella bestiolae
Pathway
kbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30209267 (I302_105748)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kbi03041
]
30209267 (I302_105748)
Spliceosome [BR:
kbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
30209267 (I302_105748)
Complex C
U5 SnRNP specific factors
30209267 (I302_105748)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
HAT_PRP39_N
TPR_19
TPR_16
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
TPR_9
TPR_21
TPR_6
ARM_TT21_2nd
TPR_2
ARM_TT21
ARM_TT21_N
ARM_TT21_C
DUF1835
Motif
Other DBs
NCBI-GeneID:
30209267
NCBI-ProteinID:
XP_065726211
UniProt:
A0AAJ8KAD8
LinkDB
All DBs
Position
4:join(479118..479287,479365..479535,479602..479878,479963..480162,480225..480417,480477..480603,480658..481294,481362..481620,481688..482066,482147..482412,482556..482699)
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AA seq
940 aa
AA seq
DB search
MSHIGTVKHIPKEVRYNFLQMAAPASYVAGLGRGASGFTTRSDIGPAREGPSAETIAEAQ
AKRGEEVPDPEALQDPDDERNLFAGTVYEADDEEADRIWESVDERMDARRRARREAVEAE
QAAKERALNPKLQTQFADLKRNLSSLNDSDWDSIPEAGNLTGKRRKHNMRLEENQNGRSY
AVSDTVMADLANRNMLLGELDKAQQENGGFDTPAADGTMTDFIAIGNARDKVLSLQLDRA
SKDAANGSSTSVDPRGYMTALNSQIVQTDAQIGDIKQARQLLQNLIQTNPKHAPGWIAAA
SLEVHAKKMVAARKIIAEGCEKCPKSEDVWLNAAELNTPENAKVILGRAVQHVPQSVKVW
LKASSLESDVMAKKRVLRKALEFIPNSVRLWKETVNLEDDPEDARVLLTRAVEVIPTSVE
LWLTLARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAIGDVKLEDEAEKTRK
LAAQVDKLMIGAVNSLKKNQVILSREQWLQEAERCEQDGSPLTAQAIVKATIHQDVEEED
RKNVWVEDAERAAKGGFFEVARACYVVVLETFPTSPSVWRRAAEFEKAHGTPQAVQDILA
KGVQHCPQAEVLWLMAAKEKWVGGDVPGAQAILSEAFKQNEDSESIFLAAAKLAAETGEM
EAATQILEKARVQADTERIWMKSAVLQRQLGHLDAALELLEQGIKKYPSFDKLHMIRGQI
HESRNATANARAAYAQGCKACAKSIPLWILAARLEEKAGITIKARSLLESARMKNPKNDE
LWAESVKIEERSGTPQQAKAVLARAMQECPTSPILWSMAIFMEQPQQRKGRSVDALKKAG
EHPAVILAVARLFWGERKIEKTRQWMQNAITADADWGDAWGWWLKFEKQHGEAERQELVI
EKCIAAAPHHGPVWQAVSKDLGNIGESTREIIELVAQKLE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacatcggtacggtcaagcacatccccaaggaagtgcgatacaacttcctgcag
atggctgctcctgcatcgtatgtagcaggtttgggtcgaggtgcatctggtttcaccact
agatcagatattggtccggccagagagggtccttcagcagagactattgccgaggcccaa
gccaaaagaggggaagaagtacctgatccagaagcattacaagatccagatgacgagagg
aatttgttcgctggtacagtttatgaagcggacgatgaagaggcagataggatatgggag
agtgtggatgagcggatggacgctaggagaagagctaggagagaagcagttgaagccgaa
caagccgctaaagagcgagctctaaaccccaagttgcaaactcaatttgccgacctcaag
cgaaatctttcctctttgaacgattcagattgggactctatacctgaggctggtaatttg
actgggaaaaggcggaaacacaatatgagattggaagagaaccagaatggtagaagttat
gctgttagtgatactgtgatggcggatctggcgaataggaatatgttattgggcgaattg
gataaggctcagcaggagaacggcggtttcgatactcccgctgcagatggtacaatgacc
gattttatcgctattggtaatgcaagagacaaagtattgtctttgcagcttgatagagct
tctaaagatgctgcgaatggttcttcaacgagtgtagatcctaggggttatatgactgcg
ttgaacagtcagatcgtacagactgatgcgcagatcggtgatatcaaacaagctcgacaa
ctgctacagaacctcattcaaaccaatcctaagcatgctcctggttggatcgcggctgct
tcgctggaagtgcatgctaagaagatggtggctgctagaaagattatcgctgagggatgt
gagaagtgcccgaagagcgaagatgtatggttgaatgctgctgagttaaatacccccgaa
aatgccaaagtcattcttggccgagctgtgcagcatgtaccccaatcggtgaaagtctgg
cttaaagcttcttcgttagaatctgatgtcatggctaagaagagggttctacgaaaagcg
ctcgaatttatccccaactctgtccgactttggaaggaaaccgtcaatctcgaagatgat
cctgaagatgcgcgagtactgcttactcgtgcagtcgaggttattcctacctctgtggaa
ctatggcttactttggctcgtctggaaacacccgaaaacgcgaaacaagtgctcaattca
gcgagaaagcgtatccccacttctcacgagatctggattgcagctggacgacttgccgag
caatcaccttctgccattggagatgtcaaattggaggatgaagctgagaagactcgtaaa
ttggcagctcaagtggacaaactcatgattggtgctgtcaactcgctgaagaagaaccaa
gtcatcttgtcgagggaacagtggttacaagaagctgagagatgtgaacaagatggaagt
ccactcactgctcaggctatcgttaaagctacgatccatcaggatgtcgaagaggaagat
aggaagaacgtttgggtggaagatgccgaacgtgctgcgaaaggtggcttcttcgaagtt
gcacgagcatgttacgtggttgttttggaaactttccctacttccccttcggtttggagg
agggctgccgaattcgagaaggctcatggcacaccacaagccgtccaggatatcctcgca
aagggtgtacaacattgtcctcaggccgaggttctctggctcatggctgccaaggagaaa
tgggttggaggggatgttccaggagctcaagcgattttgtcagaagcattcaagcagaac
gaagattccgaatctatcttcttggctgctgcaaaactcgctgccgagactggcgaaatg
gaagctgctacccagatattggagaaggcaagggtacaagctgatactgagaggatatgg
atgaaatcggcagtcttacagcgtcaacttggccatttggacgctgcgctcgaattgttg
gaacaaggaatcaagaaatacccttcattcgataaactacatatgatccgaggccagata
cacgaatctcgaaatgccactgcgaatgcccgagcagcatacgcacaaggctgtaaagct
tgtgccaagtcgattcctttatggatacttgctgcgaggttagaagagaaagctgggata
accatcaaagctagatcgctcttggaatctgctagaatgaagaaccctaagaatgatgag
ttgtgggcagagagtgtcaaaatcgaagaaaggtcgggtacgccacagcaggctaaggct
gttctggctagggccatgcaagaatgtcctacctcgccgatcctctggtccatggcaatc
ttcatggaacagcctcaacagcgtaaaggaagatcggtggacgcactcaagaaagcgggt
gaacatcctgctgtcatcttggctgttgcgcgattgttttggggagaaaggaagattgag
aagaccagacagtggatgcagaatgccattacggctgatgcggactggggggacgcttgg
ggttggtggttgaagtttgagaaacagcatggagaagctgaacgacaggaactggtcatt
gagaaatgtattgctgctgcgccgcatcatgggccggtttggcaagccgtttcaaaagat
ctggggaatataggtgaatccaccagggagattatcgaacttgtagcgcagaagttggaa
tga
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