Kwoniella bestiolae: 30211681
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Entry
30211681 CDS
T10967
Symbol
I302_108345
Name
(RefSeq) polyadenylate-binding protein, cytoplasmic and nuclear
KO
K13126
polyadenylate-binding protein
Organism
kbi Kwoniella bestiolae
Pathway
kbi03015
mRNA surveillance pathway
kbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
30211681 (I302_108345)
09123 Folding, sorting and degradation
03018 RNA degradation
30211681 (I302_108345)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbi03019
]
30211681 (I302_108345)
03041 Spliceosome [BR:
kbi03041
]
30211681 (I302_108345)
Messenger RNA biogenesis [BR:
kbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
30211681 (I302_108345)
mRNA cycle factors
Stress granule specific factors
30211681 (I302_108345)
Spliceosome [BR:
kbi03041
]
Complex C
Other components
Complex C specific factors
30211681 (I302_108345)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_MARF1
RBD_DEAH11
RRM_RdRP1_2
Cucumo_2B
Motif
Other DBs
NCBI-GeneID:
30211681
NCBI-ProteinID:
XP_019044002
UniProt:
A0A1B9FVX4
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All DBs
Position
7:join(1142770..1142972,1143022..1143244,1143291..1143376,1143425..1143909,1143959..1144053,1144106..1144773,1144828..1145038)
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AA seq
656 aa
AA seq
DB search
MSADATSPAPAAAKPAAPTQATPNAEAPAPAAAQQPSASASLYVGELDSSVTEAMLFEIF
NMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKNRPCRIMWSQRDP
ALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGDILSCKVGTDETGKSRGFAFVHYSTGEA
ADAAIKAVNGMLLNDKKVFVGHHVGKKERLSKVEEQRSQFTNVYIKNLDPETTDAEFEEL
VKPFGATVSVALSKDDAGVSKGFGFVNFESHEAARKAVDELNDKEVKGRKLYAGRAQSKL
ERESELKKSHEEKRMENEAKSAGVNLYVKNLDDEWDDDRLRAEFDSFGTITSCKVMKDEN
EVSRGFGFVCFSAPEEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRSNMR
MQYGPGGFGGMQGYMGQPVYGYPPMPGYGQPMPGMPPMRGPMMGYPGGPQNAMQSRPRYA
PGGQPMPGAPYGGPPPMGGAYGGVPPQYPVRPGGARIPAAPSSNGPRGAGGPSPVGVPQG
LPRANGQGRPQETQAQAPRLDSQTLARAPPAEQKQMLGEALYPLIFETQPDLAGKITGML
LEMDNAELLHLVESPAALQDKVDEALRVLAEWGKGDEKANGETTEVKEEVKEEKAE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgacgccacctcccccgctcctgctgcggccaagcctgccgccccaactcaa
gcgactcccaacgctgaagctcctgctcctgctgctgcccaacaaccctcagcatcagcc
agtctttacgttggtgagcttgactcgagcgtcaccgaggctatgctcttcgagatcttc
aacatgatcggccctgttgcctctatccgagtctgtcgagacgccgtcacccgacgatcc
ctcggatacgcctacgtcaactacctcaacgccgctgacggtgaaagggccctcgagcac
ctcaactactccctcatcaagaacagaccctgtcgaatcatgtggtcccaacgggaccct
gctttgagaaagactggacaaggaaacattttcatcaagaacttggatgagggtatcgac
aacaaggccctccacgacaccttcgccgctttcggtgacatcctttcatgcaaagttggc
accgacgagaccggaaagagcagaggttttgccttcgtccattactccactggtgaggct
gccgacgccgctatcaaggctgtcaacggaatgctcctcaacgacaagaaagtcttcgtc
ggtcaccacgtcggaaagaaggaaagactctccaaggttgaagagcaacgatcccagttc
accaatgtttacatcaagaaccttgaccccgagaccaccgacgctgagttcgaagaactc
gtcaagcccttcggtgctactgtttccgtcgctttgagcaaagacgacgccggtgtcagc
aaaggtttcggtttcgtcaacttcgaatctcacgaggctgctagaaaggctgttgacgag
cttaacgacaaggaagtcaagggaagaaaactttacgccggtcgagcccaaagcaaactt
gagagggaatccgagttgaagaagagtcacgaggagaagagaatggagaacgaggctaaa
tctgctggtgtcaacctctacgtcaagaaccttgatgacgaatgggatgacgaccgactc
cgagctgaattcgactctttcggtactatcacctcttgcaaggtcatgaaggatgagaac
gaagtctccagaggcttcggtttcgtctgcttctccgctcccgaggaagccaccaaggct
gtatccgagatgaacggtaaaatgattggcaccaagcccctctacgtcgccctcgctcaa
cgaaaggacgttcgaagacaagccctcgaatctcaaattgcccaacgatccaacatgcga
atgcaatacggtcctggtggattcggtggtatgcaaggttacatgggtcaacccgtctac
ggttacccacccatgccaggatacggtcaacccatgcctggtatgccccctatgagaggt
cctatgatgggttacccaggtggaccccaaaacgccatgcaatcaagacctcgatacgct
cctggtggtcaacccatgcccggtgctccttacggtggacctcctcctatgggtggtgct
tacggtggtgtccctccccaataccccgtccgaccaggtggtgctagaatccccgccgct
ccttcctccaacggtcctcgaggtgccggtggtcccagccctgtcggtgttccacaaggt
ctcccccgagccaatggtcaaggcagacctcaagaaactcaagctcaagctcctcgactc
gattcccaaactttggctcgagcccctcctgctgagcaaaagcaaatgctcggcgaagct
ttgtaccccttgatctttgaaacccaacccgatctcgccggtaagatcactggtatgttg
ctcgagatggacaacgccgagctcttgcacctcgttgagtcccctgccgctctccaagac
aaggtggatgaggctctccgagttctcgctgaatggggtaaaggtgatgagaaggccaac
ggtgagaccaccgaggtcaaggaggaggtcaaggaggagaaggctgagtag
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