Kwoniella bestiolae: 30212276
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Entry
30212276 CDS
T10967
Symbol
I302_108740
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
kbi Kwoniella bestiolae
Pathway
kbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30212276 (I302_108740)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbi03019
]
30212276 (I302_108740)
03041 Spliceosome [BR:
kbi03041
]
30212276 (I302_108740)
Messenger RNA biogenesis [BR:
kbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
30212276 (I302_108740)
Spliceosome [BR:
kbi03041
]
Complex B
Other components
Prp19-related factors
30212276 (I302_108740)
Complex C
30212276 (I302_108740)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
MIT
TPR_12
ARM_TT21_C
NRDE-2
DUF6713
Motif
Other DBs
NCBI-GeneID:
30212276
NCBI-ProteinID:
XP_019043302
UniProt:
A0A1B9FTZ3
LinkDB
All DBs
Position
8:complement(join(411363..411709,411892..412408,412480..412680,412743..412824,412879..414029,414120..414908))
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AA seq
1028 aa
AA seq
DB search
MSAEDSPLASLFSRFPLTFPIPTPLTHPHLISASDLSTEEDLLHNPDNLRSWLSYITQLK
QRISANEPDKPEQPSPEELLLGPLSTHVSREGLQQLTLVYERALAIFPTSFKLWRGYYNM
RQSYVLGDLTPAAKTARTQHAKRGSGFKTNVRELLEAAEEANEWIGGLDGIVGYEEWRSL
IATGERMIACLSHLPVPWLLHLSVLFHPKCPATFKRTYARRTFDRALRTLPPSLHGRVWG
LYLRWAEMIGGEAGERVWRRFLKVDASLTERHITYLLDSTPPRPLAASKYLLSLARRAAK
NLYSSLEGKSPYQLFVDFLELVERYADEVGMDEEQTLELKATKQAVVDEISKSDQEDAPA
PTEEPASIHGRLIRIAGPPVPVEQGKIFKPKDAISAKKGPEELPYDEDTDPSNSRLLDVE
GIVERDGLEVYKDQAGRLWTGLATYWIKRGEFDRATATFERGLAAVVTIRDFTQIFDAYA
EFSETMISTLMDAIADEDNLADEEFDAEETEKELDERMKKFEELMDRRPFILNEVLLRRN
PNEVVEWEKRIALFGDDDEKVVETYVKALDTINPRKATGPLYPLYVNFAKFYEEGGSKDP
ESGEPRNEPDLKQARKILERAAKVPYKSVDELAEVWCEWAELELRNENYDEAIRLMQRAT
TIPRDPKKINFYDESLSPQQRLFKSLKIWSFYSDLEESIGSVETTKVVYDKIMELKIANA
QVIVNYAAFLEENKYFEESFKVYERGIELFHPSVAFEIWNIYLSKFVKRYGGKKLERARD
LFEQALENCPPKFCKPIYLLYGKLEEEHGLAKRAMGIYDRACATVQDSDKFDMFTIYIAK
ATANFGLPATRPIYERALESLPDKQTSEMCKRFARMERKLGEIDRARAIYAHASQFCDPR
VDAEFWEEWNLFEVDTGSEDTFREMLRIKRAVQAAFNTETSFIAAQTAAAAKGAEKPTDT
AKDAADPMAAMERDLSGSGTGTTKKTGGPAFVASTLKNQNAHGIDQAEDEGEGEVANPDA
IEMDEDEF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaagactcccctctcgcctccctcttctcccgcttcccactaaccttccca
atccctacacctctcacccaccctcacctcatctccgcctcagacctctcaacagaggaa
gacctcctgcacaaccccgacaacctccgatcatggctctcctacatcacccagctaaaa
cagcgcatatcagccaatgaacctgacaagcccgaacagccatcgcctgaggaacttctc
ctaggtcccctgtcgacccacgtctctcgcgagggattacagcagttgaccttggtgtat
gaaagggcactggcaatctttcctacgagcttcaaactctggagaggatattacaatatg
cgtcaatcgtatgtccttggagatcttacaccagccgctaagactgctagaacccagcat
gcaaagaggggatcagggttcaagacgaacgttagggagttgctcgaagctgctgaagag
gctaatgagtggatcggcggactggacgggatagtaggctacgaagagtggagatccctt
atagctactggagaacgaatgatagcttgtctgagccatttgcctgtaccgtggctattg
catctttcggttctgttccaccccaaatgccctgctacattcaagaggacctatgcgcgc
agaacgtttgatagagctctcaggacactccccccaagtttacatgggagggtgtgggga
ttgtatctaagatgggctgagatgattggcggtgaggctggcgagagggtttggagaagg
tttttgaaggtcgacgcaagtctcaccgaacgacatataacctacctcctcgactccacc
ccacctcgtcccctcgccgcatccaaatacctcctctccctcgctcgtcgagcagctaag
aacctgtactcgtccctcgagggtaaatcgccttatcagctcttcgtcgacttcttagaa
ctggtagaaagatatgcagatgaagtaggaatggacgaggagcagacactagagctgaaa
gctactaagcaggctgtggtggacgaaatttcgaaatccgatcaagaagacgcgcctgcc
cccactgaggaaccggccagtatacatggccgtctcattaggatagccggtccgcccgtg
ccagtagaacaagggaagatattcaaacctaaagatgctatttccgctaagaagggtcca
gaagaactcccttacgacgaggacaccgacccctccaactcgcgcttactggacgtagaa
gggatagtggagagagatgggttggaggtatacaaagatcaggcaggtagactgtggacc
ggtctagctacgtattggatcaagcgtggagagtttgatcgggcaacggcaacgttcgaa
cgcggtctggcggccgttgtcacgatccgagatttcacgcagatattcgacgcctacgct
gaattctcagaaacgatgatctccactttgatggatgctatcgccgatgaagataatttg
gccgatgaggagtttgacgccgaagaaactgagaaggaattggacgaacggatgaagaag
tttgaggagctgatggatagacgaccgttcatcttgaatgaggtgttacttaggaggaac
ccgaacgaagtggtcgaatgggagaagaggatcgcactgttcggtgacgatgatgagaaa
gtggtggagacttacgtgaaagctttggatactataaatccaaggaaggccactggtccc
ctatatcccctttatgtgaattttgcgaagttttatgaagaaggtggaagtaaggatccg
gagagtggtgaaccgaggaacgaaccggatttgaagcaggctaggaagattttggagaga
gctgcgaaggtgccgtataagagtgtggatgagttggcggaggtttggtgtgaatgggcg
gaattggaattgaggaatgagaactacgatgaagcgatacggttgatgcagagagctacg
acgatacctagagatcctaaaaagatcaacttctacgatgaatccctctcacctcagcag
cgtctattcaagtccctaaagatatggtccttctacagtgatcttgaagaatctatcggt
tcagtggaaactaccaaagtggtgtatgacaagatcatggaattgaagattgccaatgct
caagtcattgtcaactatgctgcgttcttggaagagaacaaatatttcgaggagagtttc
aaggtgtacgaacgaggaatcgagctattccacccctcagtagcattcgaaatatggaat
atctacctatccaaatttgtcaaacgatacggaggcaagaagctcgaaagggctcgagat
ctattcgaacaggctctggagaactgtccacccaaattctgtaagccgatttacctccta
tatggtaaattggaagaagaacatggattggccaagagggcaatgggaatatacgaccga
gcatgtgcgaccgtgcaggattcggacaaattcgacatgttcaccatctatatcgccaag
gccactgcgaactttggtttacccgccacgagacctatctatgagagagctctggagagt
ttgcccgataagcagacttcggagatgtgtaagcggtttgcgaggatggagaggaagctt
ggggagattgatagggccagggcgatctatgctcatgcgagtcagttctgcgatccgagg
gtggatgcggagttctgggaggaatggaacttgtttgaggtcgacaccggctcagaagac
accttccgagaaatgctgcgtatcaaacgagccgtccaagcagcattcaacaccgaaaca
tccttcatcgccgctcaaacagcagcagcggcaaaaggagctgagaaaccaaccgacaca
gctaaagacgctgctgatcccatggccgccatggagagagatctatcaggttctggtaca
ggtacgaccaaaaagacaggtggtcctgctttcgtagctagtacgttgaagaatcagaat
gctcatgggatagatcaggctgaggatgaaggggaaggggaggtggcgaatcccgatgcg
atcgagatggatgaggatgagttttag
DBGET
integrated database retrieval system
