Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis): CKBE_00013
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Entry
CKBE_00013 CDS
T02427
Symbol
rnhA
Name
(GenBank) RNAse H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
kbl
Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)
Pathway
kbl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
kbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKBE_00013 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbl03032
]
CKBE_00013 (rnhA)
Enzymes [BR:
kbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
CKBE_00013 (rnhA)
DNA replication proteins [BR:
kbl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
CKBE_00013 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
CKBE_00013 (rnhA)
Elongation factors (archaeal)
CKBE_00013 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
AFZ83202
LinkDB
All DBs
Position
complement(11672..12127)
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AA seq
151 aa
AA seq
DB search
MNSYSKVELWTDGACKGNPGPGGWGVMIIYPDGKRIDLYGGENNTTNNRMELLAIIEGLK
KVNKDFINIDIYTDSKYVVNGMTKWINNWIKNNWHTASGKDVKNIDLWKILCNQVIESNV
KWYWVEGHSNNEGNNIADRLANMGVSSLSID
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttatagcaaagttgaattatggacagatggagcttgtaaaggaaatccagga
ccaggcggatggggtgttatgataatctacccagatgggaagagaattgatttatatgga
ggagaaaataatactacaaataatagaatggagctattagctataattgagggattaaaa
aaagtaaacaaagactttataaatatagatatatatacagattctaaatatgtagtaaat
ggcatgacaaaatggattaataattggataaaaaataattggcatactgcttctgggaaa
gatgtaaaaaatattgatctatggaaaatcttatgtaatcaggttattgagtctaatgtc
aagtggtactgggtggaagggcactccaacaatgaaggtaataacattgctgatagatta
gctaatatgggagtatctagcttatctattgattga
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