Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis): CKBE_00037
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Entry
CKBE_00037 CDS
T02427
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kbl
Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis)
Brite
KEGG Orthology (KO) [BR:
kbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kbl03016
]
CKBE_00037
Enzymes [BR:
kbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CKBE_00037
Transfer RNA biogenesis [BR:
kbl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CKBE_00037
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
AFZ83226
LinkDB
All DBs
Position
40352..42247
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AA seq
631 aa
AA seq
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MNMYVFYDEGKSFKTGSIISETENNIQIISEHGKHIKIKQVNCLFKFDTPDPLALMTEAK
NLTKELDAEFLWECSPKNNFKAIDLAEEYFGHRPTNIEYVSVLILLHNSPIYFHKKGTGQ
YISATEYAISSALIGIEKKKLIEQEQEHLKTQMLNGILPKTIHENAELLVTSPDKQSIQW
KALNSACMELQKSPEQLLLSLKTWPNRLILLKKKFISANFPNGLDFPKASNIKKNRNLNL
SNNEIYSIDDKNTIEIDDGLSVRELENGEVEVGIHIAAPGLGIEPGSIYDTNARFRASTI
YMPSEKIQMQPDAILDEFSLDKGKETPALSLYVIFDRDYNIIKSSSCIELVKLKDNLRTN
HLEEEYTASNLDNPEKDVIYSNWIRPLWKIAQKLNSSRQVNRGFSENNSYVDFSIYLEGD
TNNPDTIVQIEKRRRDSPINLVVSEFMILANCLWGGLLKKYHIPGIYRSQQPMSRVKVGT
IPLPHSGIGVPQYIWSTSPLRRYVDLVNQWQLISIVENEIAAPLFSPFRNRGNELLTIIQ
EFELRYSVISNFQNEIENYWYIKWLIQNGIKKTIAHVIKDNLIKLIEVPLFANISDMPKN
PRGTAMEVEITDIDELNCKLTCKYIQRSESI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtatgttttctacgatgaaggaaaatccttcaagacaggtagtataatctct
gaaacagagaataacattcaaataatctcggagcacggcaaacacataaaaattaaacaa
gtgaattgtttatttaaatttgatactcctgatccacttgctctaatgacagaagctaaa
aatctaacaaaagaactagatgcagaatttctatgggaatgttctcctaaaaacaacttt
aaagctatagacttagcagaagaatattttggacacagaccaacaaatatagaatatgtt
agcgttttgattttattacataactcacctatatattttcacaagaaaggtactgggcaa
tatatatcagctacagaatatgcaatatcttctgctttaatcggcatagagaaaaaaaaa
ttaatagagcaagaacaagaacatctgaaaacccaaatgttgaatggcattctacctaaa
actatacatgaaaatgcagaattattagtaacaagtccagataaacaatcaattcaatgg
aaagcattaaattcagcatgtatggaattgcaaaaatctcctgagcaacttcttctgtca
ttaaaaacatggcctaaccgattaatactattgaaaaaaaaattcatctcagcaaatttt
ccaaacggattagatttccctaaggcttctaatattaaaaaaaatagaaatctaaattta
tccaataatgaaatatactcaatagatgacaaaaatactatagagatagatgatggccta
tctgtaagagagctagaaaatggcgaggtagaagtaggcatacatatagcagctccaggc
ttggggatagaaccaggtagcatatatgatacgaatgcaagatttagagcatctactata
tatatgcctagcgagaaaattcaaatgcaacccgatgcaatattagatgaattctctctt
gataaaggaaaagaaactccagctttatctttatatgttatttttgatagggattacaat
attattaaatctagctcctgtatagaacttgtaaaattaaaagataatttgcgcactaat
catcttgaagaagaatacacagcatctaatttagacaatcctgagaaggatgtaatatac
tcaaactggataagaccattatggaaaattgctcagaagttaaattcctcaagacaagtt
aacagaggattttcagaaaacaattcttacgtagatttttccatttatctagaaggagac
actaataaccctgacaccatagtgcagatagaaaaaagaagaagagattctcctataaat
ttagtagtctcagaattcatgattcttgcaaactgcttatggggggggctactaaaaaaa
tatcatattcctggaatatatagatcccaacaaccgatgagtagagtaaaagttggaact
atacctctaccgcactctgggataggagtaccacaatacatatggagcacttctccacta
cgaaggtatgtagatcttgttaatcaatggcaattaatatctatagttgaaaatgaaata
gctgcgcctctattttccccatttagaaatagaggaaatgagcttctgactataatacaa
gaatttgaactccgatattccgttatatcaaattttcaaaatgaaatagagaattactgg
tacataaaatggctaatacaaaatgggataaaaaaaaccatagcacacgtaatcaaggac
aatttgataaaattaatcgaagtcccactatttgcaaatataagtgacatgccaaaaaac
ccaagaggaacagctatggaagtagaaatcactgacattgatgaattaaattgcaagcta
acctgtaaatatatacagcgatctgaatctatctaa
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