Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis): CKBE_00258
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Entry
CKBE_00258 CDS
T02427
Name
(GenBank) formamidopyrimidine-DNA glucosyllase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kbl
Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis)
Pathway
kbl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKBE_00258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbl03400
]
CKBE_00258
Enzymes [BR:
kbl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CKBE_00258
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKBE_00258
DNA repair and recombination proteins [BR:
kbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKBE_00258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
C1_2
Motif
Other DBs
NCBI-ProteinID:
AFZ83447
LinkDB
All DBs
Position
complement(275147..275992)
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AA seq
281 aa
AA seq
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MPELPEIELLKREIGPRIQNKTILKFKIRNHKLRWPILASLPKIITDKNVINCSRRGKYL
LFHFEHGVQIIHLGMSGSLQFITNEPPGKHDHIEWTFNDSTILRMNDPRRFGAILWHDIK
NDGTLYDNKIFKNLGLEPFSRKLTEQYLYNKLSNKKKSIKQILLDGNIVVGIGNIYSSES
LFKSKINPLISASKLSISDCAKLILCIRETLCNSIKSGGSTIRNYVSTSGQSGNYIKNHA
SVYGRNELPCNVCGFKIIKIKQSGRSTYYCPNCQNVDKKIT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccggaaatagaattacttaaaagagagataggaccaaggatacaaaat
aaaactattttaaaattcaaaattagaaatcataagctaagatggcctatactagcttcc
cttccaaaaattataacagataagaatgttataaactgctctcgtagagggaaatattta
ttgtttcattttgaacatggtgtgcaaataatacacttgggaatgtctggatcactgcag
tttataactaatgagccgcctggaaaacatgatcacatagagtggacttttaatgattca
acaatactaagaatgaatgatccaagaagatttggggcaatactatggcatgatataaaa
aatgatggcacattgtacgataataaaatttttaaaaaccttggcttagaaccattttca
agaaaactaacagaacaatacctctataataagctttccaataaaaaaaaatctataaag
caaattcttttggatggaaatatcgtagtaggaattggtaatatatattcctcagagagc
ctatttaaatcaaaaataaacccattaatatcagcatcaaaactttccataagtgactgc
gctaaactaatattatgtatacgtgaaacactatgcaattctattaaatctggaggaagc
actataagaaattatgtaagcactagtgggcaaagcggtaattatatcaaaaatcatgct
tctgtttacggaagaaacgaacttccttgcaatgtatgcggatttaaaataataaaaata
aaacagagcggacgttctacttattattgtcctaattgtcagaatgtagataaaaaaatc
acataa
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