Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis): CKBE_00540
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Entry
CKBE_00540 CDS
T02427
Symbol
rpsA
Name
(GenBank) small subunit ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
kbl
Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis)
Pathway
kbl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
kbl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CKBE_00540 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
kbl03011
]
CKBE_00540 (rpsA)
Ribosome [BR:
kbl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CKBE_00540 (rpsA)
Bacteria
CKBE_00540 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AFZ83729
LinkDB
All DBs
Position
complement(597466..599178)
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AA seq
570 aa
AA seq
DB search
MSSFSSTTFGRESFADLFAESLKKQDMKSGEVISAEVVRIDHNFIIVNAGLKSEALIPIE
EFLDDKGEIEVNQGDFVSVAIDSLENGYGDTVLSRDRAKRLSAWLKLEQALESGELITGS
ITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTMEFKVIKLDRKRNNVVLSRR
QVLEASMGEERQKLLENLYEGAIVKGVVKNITDYGAFIDLGGIDGLLHITDMAWRRVRHP
SEVLQVCQEIEAKVLKFDQEKNRVSLGVKQLGEDPWVDLARRYPQGTHLFGKITNLTDYG
AFVEVELGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRP
NPWEEFAVNFKKGDKVKGAIKSITDFGVFVGLPGGIDGLVHLSDLSWTDNGEESVRNLKK
GDEIEAVVLGIDTAKERISLGVKQLEGDPFQNFVSSHDKGSTVHGTVKSVEPKGAIVNLS
LDVDGYLRSSEISSGRVEDATSILKSGDPIEALIVNIDRKTRSIQLSVKARDSIDTAGVI
QRMSDASASSGTTNLGALLKEKLDQQRNDG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttcctcaactacatttggcagagaaagctttgctgatttattcgcagaa
agtcttaaaaagcaagatatgaaatcaggtgaagttatcagcgctgaagtagtgcgtatt
gatcataatttcattattgtaaatgcaggtctcaagtcagaggctcttatcccgatagaa
gaatttctagatgataagggagagatagaagttaatcagggagattttgtttctgtagcc
attgattctttagagaatggatatggagacactgttttatcacgtgatcgtgcaaaacgt
ctatctgcttggttaaaattagaacaagctttagaaagtggagagttgattactggatct
attacaggcaaggtcaagggaggccttactgttatgactaatggtattcgtgctttcttg
cctggttctttagttgatttgcgtcctgttaaggatacaactccatatgaaggcaaaacc
atggagtttaaagttataaagcttgatagaaagagaaataacgtagtgttatctagacgt
caggttttagaggctagcatgggagaggaacgtcaaaaactcttagagaatttatatgaa
ggagcaatagttaagggtgttgtcaaaaatattactgactatggtgcttttatagatcta
ggagggatagatggtttattgcatattacagatatggcttggcgtcgtgtaagacatcct
tctgaagttctgcaagtgtgccaagagatagaagccaaggtgttaaaatttgatcaagaa
aagaatcgggtttctttaggtgttaaacaattaggagaggatccttgggtagatctagct
cgtcgttatcctcagggaactcatttgtttggaaaaattactaatctaactgattacggt
gcttttgtagaagttgaattaggaatagaaggattagttcacgtgtcagaaatggactgg
acgaataaaaacgtagatccacgaaaagtagttactctaggtgaagaagtagaagtgatg
gtgttggagattgatgaagatagacgccgcatatcacttggtatgaagcaatgtcgtcct
aatccttgggaagaatttgcagtaaactttaagaaaggtgataaggttaaaggagctatt
aagtctataacagattttggtgtttttgtaggtcttcctggaggaattgacggcttagtg
catctatcagatttatcatggacagataatggtgaagaatcagtaagaaatctaaagaag
ggagatgaaatagaagcagttgttctcggcatagatacagctaaggaacgtatttctctt
ggagttaaacaacttgaaggtgatccttttcaaaattttgtgtcgtcccatgataaagga
tcgactgttcatggcacagtaaaatcagtagagcctaaaggagctatcgtaaatctttct
ttagatgttgatggttatctacgttcctctgaaatttcttctggtcgagttgaagatgca
acctcaatattaaagagtggtgatcctatagaggctcttattgttaatatagatagaaag
actcgttctattcaattgtcagttaaagctagagatagtattgatactgctggtgtaatc
caaagaatgtcagatgctagtgcttcttcaggaactactaatctcggagctttactgaaa
gaaaaattagaccaacaacgtaatgatggctga
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