Kwoniella botswanensis: 90011893
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Entry
90011893 CDS
T11304
Symbol
L199_000906
Name
(RefSeq) uncharacterized protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
kbo Kwoniella botswanensis
Pathway
kbo03018
RNA degradation
kbo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kbo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
90011893 (L199_000906)
09123 Folding, sorting and degradation
03018 RNA degradation
90011893 (L199_000906)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbo03019
]
90011893 (L199_000906)
03041 Spliceosome [BR:
kbo03041
]
90011893 (L199_000906)
Messenger RNA biogenesis [BR:
kbo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
90011893 (L199_000906)
mRNA degradation factors
5'-3' decay
Lsm complex
90011893 (L199_000906)
Spliceosome [BR:
kbo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
90011893 (L199_000906)
Complex C
U2 snRNP components
90011893 (L199_000906)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
90011893
NCBI-ProteinID:
XP_064742736
LinkDB
All DBs
Position
1:complement(join(2342441..2342463,2342521..2342623,2342890..2342950,2343183..2343269,2343446..2343456,2343521..2343523))
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AA seq
95 aa
AA seq
DB search
MLIFSFFKTLTDQVITVELKNDLSITGTLKSVDQFLNIRLDGISVEDPERHPHMLAVKNC
FIRGSVVRYVRMAARSVDTTLLEDATRREAKEAKK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcttctcattcttcaaaactctcacggatcaggtgataactgtcgaactaaag
aatgatctctcaataacgggtactttgaaatcagttgatcaattcttgaatattcggtta
gatggtatttcggtggaagatcctgaaagacatcctcatatgctcgccgtgaaaaactgt
ttcatccgaggttcagtggtccgatacgtcaggatggcagctaggtcggttgacaccacg
ttgttggaggacgctacgaggcgagaggcgaaagaagctaagaagtaa
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