KEGG   Kwoniella botswanensis: 90012026
Entry
90012026          CDS       T11304                                 
Symbol
L199_001039
Name
(RefSeq) uncharacterized protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
kbo  Kwoniella botswanensis
Pathway
kbo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kbo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    90012026 (L199_001039)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:kbo03041]
    90012026 (L199_001039)
Enzymes [BR:kbo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     90012026 (L199_001039)
Spliceosome [BR:kbo03041]
 Complex C
  Other components
   Step II factors
    90012026 (L199_001039)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C WHD_HA2 S1 DEAD AAA_22 T2SSE AAA_30 nSTAND3 AAA_7
Other DBs
NCBI-GeneID: 90012026
NCBI-ProteinID: XP_064742868
LinkDB
Position
1:join(2678564..2678683,2678735..2679329,2679387..2680225,2680274..2680516,2680578..2681225,2681267..2681879,2681931..2681969,2682021..2682095,2682150..2682269,2682325..2682485,2682544..2682594)
AA seq 1167 aa
MSTDKELYKLELLSLVSRVSQELFNHTKLQDKKLAEFVIASKTPEAFQTKLGEIGADFPE
WFVKNLDRLIVTMHPKYKRKAAKAKAAAANGKSGSKPAILDEQKALQSRKFPGLSMPDQD
WTSADKYLETRQTKEPSEEKLPESLTVDDTLAQLSEVASRRNRPSADDWMDGEPSSKRPR
HMDNGRDNGYGGRVSEQPRGRPGLDERPVLYKIYNGSVSNVRDFGAFVSLEGVQGRTEGL
IHVSAITSGRVTSASEFLKRGQRVKVKVMSIAGTKIGLSMRDVDQNTGADLSPHLRVKTA
QEIAEEERRAATKNLTGSNSTPLIHVDERKGSSAKRLSSPERFEIKQLIASGVVDAADYP
DLDEDLNPSASNPEIEEDIDIEVNEVEPTFLSGQTKVTLELSPVKIIKAPDGSMNRAALA
GASLAKERRDLKRLEANEEADSESREINQPWLDPMANQNERQFASDIKGNLLGQKAAQLP
AWKAANKVVSYGKITSLSIQEQRKSLPIYKLRDQLVQANQILVVVGDTGSGKTTQMAQYL
AEEGFLEHGRLGCTQPRKVAAVSVAKRVSEEVGCRLGAEVGYTIRFEDMTSPETKIKYMT
DGMLLRELLVDPDCSKYSVLMLDEAHERTIATDVLFGLLKKACKRRPDLKLICTSATLDA
AKFATYFWGCPIFTIPGRTFPVETLYTKEPEPDYLEASLITILQIHLMEPAGDILLFLTG
QEEIDTACEVLYERVKALGPQVPELIILPVYAALPSEMQSRIFEPPPPGARKVVIATNIA
ETSITIDGIYYVIDPGFAKQNAYDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRL
YTEIAYRNEMLPNPIPEIQRTNLASTILTLKAMGINDLINFDFMDPPPAATMLTALEQLY
ALGALDDEGLLTRIGRKMADFPLDPPLSKMLIKSVDYGCSEEALTIVAMLQAGGQVYYRP
KDKQAQADAKKAKFHQPEGDLLTLLAVYNGWKASKFSNPWCFENFIQTRAMKTAQDVRKQ
LIGIMDRYKHDLVSCGTNYNRVRMAICSGFFRNAAKKDPTEGYKTLVEGTPVSIHPSSAL
FQRPPEWCVYYELVLTAKEYMHQVTVIEPKWLSEVAPTFFRVADQNKISKRKASEKIEPL
FDRFATNKDDWRLSKQKRATRSSQTFG
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgtccaccgataaagaactctacaagctggagctcttgtctcttgtttctcgcgtatct
caagagctcttcaatcacaccaaattgcaggacaagaaactcgctgaattcgtgatagct
agcaagactccggaagcctttcagaccaagcttggcgaaataggtgccgacttcccagaa
tggtttgtcaaaaatctagaccgactcatcgttaccatgcatcccaagtataaacgcaag
gcagccaaggccaaagctgctgccgctaatggtaaatcagggagcaaacccgctatatta
gatgagcagaaagcattgcagtccaggaaatttccaggtctgtcaatgccggatcaggat
tggacatcggcggacaaataccttgagactagacaaacgaaggaaccgtcagaagagaaa
cttccagaatcgttgacggtcgacgatacattagctcagctttcggaagtagcatctagg
aggaacagaccatcggcagatgattggatggatggagagccctcgtcgaaacgtcctcgt
catatggataacggaagggataatggttacggtggaagggtatctgaacaacctcgaggt
cgacctggtttagatgagcgaccagtgttgtacaagatatacaatggtagtgtgtccaac
gttcgtgattttggagcctttgtgtctttagaaggtgttcagggaaggactgaagggttg
atccacgtttccgccatcaccagtggccgtgtcacttcggctagtgaattcctcaagcgt
gggcaaagagtcaaggtcaaagtgatgtccatagctggaaccaagataggattgagcatg
agagatgttgatcaaaatactggtgccgacttatctcctcacctccgagtcaagaccgct
caagaaatcgcagaagaagagcgtcgtgcagctacgaagaacctcacgggcagcaactcc
actccgctgattcacgtcgacgaacgaaaaggatcgagtgcaaaacgtctatcttccccc
gaacgttttgagattaaacaacttattgccagtggtgtagtagatgctgcggactatcca
gaccttgatgaagacctcaacccatctgcctcaaatcctgaaatcgaagaagatatcgac
atcgaagtcaacgaagtcgaacctaccttcctttctggtcaaacgaaagttacactagag
ctctcacctgttaagatcatcaaagcacctgatggatcgatgaatcgagcggctctggcg
ggagcatctctggccaaagaacgacgtgacctcaaacgtctagaagcgaatgaggaggca
gattcggaatccagagaaatcaatcaaccttggctagatcctatggccaatcaaaacgaa
cgacaattcgcttcggacatcaagggcaaccttctcggtcaaaaagctgcgcaattgccc
gcttggaaagccgcaaacaaggtcgtctcctacggaaagatcacatcactcagtatacaa
gaacaacgaaagagtctcccaatatataaattgcgagatcaactggtccaagctaatcaa
atcttagtcgtcgtcggtgataccggatccggaaaaacaacacaaatggcacagtatctt
gctgaagaaggctttttagagcatggtcgtctcgggtgtactcagcctcgtaaagttgct
gcggtttccgtcgcgaagcgtgtgtcagaggaagtaggatgtaggctcggtgccgaagtc
ggttatactatccgatttgaggatatgaccagtcctgagactaagatcaagtatatgacc
gatggtatgctgctccgagaacttctagtcgatcccgattgttccaaatactctgtattg
atgttggacgaagcgcacgagaggactattgccaccgacgtcctcttcggtctcctcaag
aaagcttgtaaacgtcgacctgatctcaaattgatctgtacatctgcgacgctcgatgct
gccaaattcgccacgtatttctggggctgtccgatttttaccattcccggtcgtactttc
ccagtcgaaactctttacaccaaagaacccgagcctgattatcttgaagcatcactcatt
actatcttacagatccatctcatggagcctgcgggtgatatactgttgttccttacgggt
caagaggagattgacacagcatgcgaagtgttgtatgaacgagtgaaagcgcttggtccg
caagtaccggagctcatcattcttcccgtttatgccgcccttccatccgaaatgcaatct
cgtatattcgaacctccccctcctggcgcacgtaaagtggtcatcgccaccaacatcgcc
gagacaagtattacaatcgacggtatatactatgtcatagatcccggatttgccaagcag
aacgcttatgaccctaagttgggtatggactcgttgattgtaactccaatctcccaagct
caagctcgacaaagatccggtcgtgctggtcgtacaggtcccggtaaatgctatagacta
tacaccgaaatcgcttaccgaaacgaaatgcttcccaatcctatccccgagatccaacgt
accaatttggcatccacgatcctcactctcaaagctatggggatcaatgatctcatcaac
tttgatttcatggatcctccacctgctgccaccatgttgactgctcttgaacaactgtat
gcgctaggagctctcgacgatgaagggcttcttacccgaatcggcagaaagatggcggat
ttcccgcttgatcctcccctatccaaaatgcttatcaagtctgtcgattatggatgttct
gaagaagctcttaccatcgtagcgatgcttcaagccggtggacaagtgtattatcgaccc
aaagacaaacaagctcaagccgatgctaagaaagcgaaattccatcagcctgaaggagat
ttgcttactcttctcgctgtttacaatggatggaaagcttcaaaattcagtaacccttgg
tgctttgagaattttatccaaaccagagcaatgaagactgctcaggatgtcagaaaacaa
ttgatcggtatcatggatcgatacaagcatgatttagtctcctgtggtaccaactataat
cgagtcagaatggccatttgttctgggttcttccgtaatgcagccaagaaagatcctacg
gaaggttacaaaaccctggtggaaggaactcccgtcagcatacatccttccagtgccttg
tttcagcggccaccagaatggtgtgtttattacgaattggtgctcaccgcaaaggaatac
atgcatcaagtcacagtgattgaaccgaaatggttgtctgaggtggcacctaccttcttc
cgagtagctgatcagaacaagatcagtaagaggaaagcatctgagaagattgagccgctg
ttcgataggttcgctaccaacaaggacgactggcgactcagcaaacagaagagggctact
cgatcatcccaaacattcggttaa

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