Kwoniella botswanensis: 90013297
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Entry
90013297 CDS
T11304
Symbol
L199_002310
Name
(RefSeq) uncharacterized protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
kbo Kwoniella botswanensis
Pathway
kbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
90013297 (L199_002310)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbo03021
]
90013297 (L199_002310)
Enzymes [BR:
kbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
90013297 (L199_002310)
Transcription machinery [BR:
kbo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
90013297 (L199_002310)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
PsiB
Motif
Other DBs
NCBI-GeneID:
90013297
NCBI-ProteinID:
XP_064744127
LinkDB
All DBs
Position
1:join(6139111..6139417,6139575..6139660,6139725..6139856,6139957..6140570,6140638..6140840,6140900..6141148,6141220..6141794,6141860..6141928,6141995..6142734,6142812..6143040,6143149..6143496,6143578..6143631)
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AA seq
1201 aa
AA seq
DB search
MVASFDPLSPSFASSSGSGVVDKSTFKTLTRERQFRHPPTTSSDVPALDELVQPHIQSFN
ALIEDEGNKGLLQLGVEDIGEKVVFDGKEWDNDPTGFGSKITYRIDRVALSKPLVPEKDK
LAIERRIFPAEARERLTTYRSRLTVNIRWTVTGPDGVSREHEEIKECGLLPVMTRSIRCN
LQNLSAEELISHGEESTSFGGYFIVNGNEKIIRYLILPRRHHPLNLYRPSFAKRGVSYTP
YGCQIRCVRPDQSACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILKALVNASDKEIFEG
LIQGEYDNTFLTDRVELLLRGQKTWNLQTGEQCLDYLGEKFRVVLSCPEDWNNIQVGSFL
LSKVVLVHLPNPRDKFRMLIFMLRKLYSLVSGATCADNPDSPQHHEVLLPGFLYGMIIKE
RFDDCLNAVKLQIQQDLRQGKARSFSDPKYFTSVLAKTNWDIGAKLSYFLATGNLVSPTG
LDLQQTSGYTIVAEKLNFYRYLSHFRCIHRGAFFAELKTTDVRKLRPESWGFLCPVHTPD
GSPCGLLNHLSHTCKIVVGQLDTSNIPALLSAHGMTQIFASSIDGRRMVCIQLDGRVIGY
ASPQKSKQLANLLRKLKTEGNPKVPIDIEIGYVPVTKGGQYPGLYLFSSRSRMMRPVTYL
ENGKLDHLGTFEQVYMDVAITKQEIENGVTTHLELDPTSMLSVIANLTPFSDFNQSPRNM
YQCQMGKQSMGTPSTALNKRTDNKMYRLQSGQTPVVRPALHNHYGFDNFPNGTNAIVAVI
SYTGYDMEDAMILNKSAHERGFGYGTVYKSDIFDLKDSVGANRNSSKPRLHFGLGRDIKD
EHTCLEFLSRDGLPRIGTRIKSGDPLAGYIDDTTGKTKFHKYKGDEVAFVDEVRLLGSDS
GDSELQKIHIKLRIPRSPVIGDKFSSRHGQKGVCSQKFPTIDMPFSESGMQPDVIINPHA
FPSRMTIGMFVESLAGKAGALHGICQDATPFKFSDSDRPVDYFGEQLKAAGYNYYGNEPM
YSGITGEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGE
MERDALIAHGTSFLLQDRLMNCSDYSTAWICRSCGSLTSLGFEDTASNEGMKEYCRICDS
HLHQQDQQDQTKKESTGTAVGVRMKDGVRKGKMDVVAVPYVFRYLCAEMACMGIRLNVTV
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggtagcatccttcgaccctctctcaccatccttcgcatcttcctcaggaagtggtgtc
gtcgacaaatcaacattcaagactttgactagagaacgtcaattccgacatccacctacc
acctcatccgacgtccccgctttggacgaattggtccaacctcatatccagtcgttcaat
gcgttgattgaagatgagggaaacaaagggttattacaattgggtgtagaggatataggg
gaaaaagtcgtttttgatgggaaggaatgggataatgatccgactggttttggaagtaag
ataacttaccgtattgacagagtagcactttcgaaacccctcgtaccggagaaagataag
ttggctattgaacgacgtattttccctgccgaggctcgagaacgtcttaccacttatcga
tcgcgattgaccgtcaatatacgatggactgtcacgggacctgatggggtttcgagagaa
catgaggagatcaaggaatgtggtttgttacctgttatgacgagatcaatccggtgtaat
ctccaaaacctttcagcagaagagctcatctctcacggcgaagaatcaacttctttcgga
ggatatttcatcgttaacggaaatgagaagatcatacgatatttgattttacccagacga
catcatcccctgaacctatatcgaccatcattcgccaaacgaggagtatcctatacacct
tatggatgtcagatcagatgtgtcagaccagatcaatcggcatgtaccaatacgatccac
tatctctctaatggaggtgctacacttagattcgcatggaggaaagtcgaatatatgatt
ccactcatgttgatccttaaagctcttgtcaacgcatccgataaggagattttcgaaggt
ctcatccaaggtgaatacgacaacacctttttgaccgatcgagtagagttattgttgaga
ggtcagaaaacttggaacctgcaaactggagaacaatgtttggattatttgggagagaag
tttagagtcgtcctgagttgtccggaagattggaataacatacaagttggaagtttcctg
ttgtcaaaggttgttttagtacatttacctaatccaagagataaattcagaatgttaatc
ttcatgcttcgaaaactttattccctcgtatccggtgctacttgcgccgataaccctgat
tcacctcaacaccacgaagttctcctccccggtttcttatacggtatgatcatcaaggaa
cgattcgacgattgtttgaatgctgtgaaattgcagatccaacaggatctaagacagggc
aaagcgagaagtttctccgatcccaaatactttacatccgttcttgccaagaccaattgg
gatattggagcaaaattatcctacttcttagccaccgggaatctcgtctctcctactggt
ttagatctccaacaaacttcaggttataccattgtcgctgagaagttgaacttctaccga
tacttgtcacatttcagatgtatccatcgaggagctttctttgcggaactcaagacgaca
gatgtccgaaagttgagaccggaatcatggggctttttatgccccgtacatactcctgat
ggttctccttgtggtctcttgaatcatttatctcacacttgtaagatcgttgttggccaa
ctcgatacatccaacattccagcattactctcagcacacggtatgacccagatattcgct
tcttccattgacggtcgacgaatggtctgtatccagttggacggccgagttatcggatat
gcctcacctcaaaaatccaaacagctcgccaacttgttgagaaaattgaaaaccgaaggt
aatccaaaggtaccgatcgatattgaaattggttatgtaccagtaacgaagggaggacaa
tatcccggattatacttgttctcatctcgaagtagaatgatgagacctgtaacgtacctt
gaaaatggtaaattagatcatctaggtactttcgaacaagtatacatggatgtagctatt
acaaagcaagagattgaaaacggtgtaacgactcatttggaactcgacccgacgagtatg
ttatcggttatagcgaatttgactcctttttcggatttcaatcagagtcctagaaatatg
taccaatgtcagatgggtaaacaatctatgggtacaccttcgactgcgttgaacaagcga
actgataacaagatgtaccgacttcaatccggtcaaacacctgtcgtccgaccagctttg
cacaaccactatggattcgacaatttccccaacggtaccaacgctatcgttgctgtcatc
tcgtataccggttacgatatggaagatgcgatgatcttgaacaaatcagcccatgaaaga
ggattcggatatggtacagtatacaaatctgatatattcgatctgaaagattccgtcggt
gccaatcgaaattcatcaaaacctagattacatttcggtctcggaagggatatcaaagat
gaacatacatgtttagaattcctatctcgtgatggtttaccaaggatcggaactcgaatc
aaatctggtgatcccctggctggatacatagatgatacgactggcaaaacgaaattccac
aaatataaaggagacgaagtggcattcgtagatgaagtgaggttattaggatcagattcg
ggtgattcagaattacaaaagattcatattaagcttagaatacctcgatcaccagtaatt
ggagataagttttcatcaagacatggacagaaaggtgtatgttcacagaaattcccgacg
atcgatatgcctttcagcgaatcgggcatgcaacctgatgtgatcatcaaccctcatgct
ttcccttcgagaatgactattggaatgttcgtggagtctctggctggtaaagcgggggct
ttgcatggtatctgtcaggatgctacacctttcaaattctcggattccgatcgacctgta
gattactttggtgaacaactcaaagctgccggatacaattactacggtaacgaacctatg
tattctggtataacgggtgaagaattccatgcggatatctatctcggtttggtctattac
cagagattgagacatatggtcaacgataaattccaagttagaacgactggacccgttgat
cctttgactagacaacctgtcaagggtcgaaaacgagcgggtggtatccgattcggagaa
atggagagagatgcgttaatagcacatggaacatcattcttgttgcaagatcgattgatg
aattgttcggattactctactgcttggatctgtcgatcatgtggatcactcacttcgtta
ggattcgaagataccgcttcgaatgaagggatgaaagagtattgtaggatctgcgattct
catttacaccaacaggatcaacaggatcaaacgaagaaagagtccacgggaactgctgtg
ggggtaaggatgaaagacggtgtgaggaaaggaaagatggatgttgtggctgttccatat
gtgttcagatatctatgcgccgaaatggcttgtatgggtatcagattgaatgtgacggtg
acatag
DBGET
integrated database retrieval system
