KEGG   Kwoniella botswanensis: 90014986
Entry
90014986          CDS       T11304                                 
Symbol
L199_004002
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
kbo  Kwoniella botswanensis
Pathway
kbo03020  RNA polymerase
kbo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kbo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    90014986 (L199_004002)
  09124 Replication and repair
   03420 Nucleotide excision repair
    90014986 (L199_004002)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kbo03021]
    90014986 (L199_004002)
   03400 DNA repair and recombination proteins [BR:kbo03400]
    90014986 (L199_004002)
Enzymes [BR:kbo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     90014986 (L199_004002)
Transcription machinery [BR:kbo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     90014986 (L199_004002)
DNA repair and recombination proteins [BR:kbo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      90014986 (L199_004002)
SSDB
Other DBs
NCBI-GeneID: 90014986
NCBI-ProteinID: XP_064745802
LinkDB
Position
1:complement(join(10613780..10613807,10613993..10614170,10614259..10616407,10616458..10616967,10617024..10617311,10617393..10617653,10617725..10618072))
AA seq 1253 aa
MSQSQEPNMMDDGFSYDPNYDYTQASGSQPLTQDYKDDVKFGMDGIEEEEEEEEPISQED
YWTVINAFFDEKGLVRQQLESFNEFIENTMQEIVDDNSKMTMDQFSQYTGVSGDETKRYE
ISFGQIYLARVNHTEMDGRTNMLFPQEARLRNLTYSAPLYVDIKKRVLQASGVDDPIEAD
WRPAVGSDGLPEGVEEDKASIGKVPVMVRSNFCLLHNLPDDQCHDIGECHYDQGGYFIIS
GSEKVLIAQERMATNHVFVFLKAAPSRWTYFAEINSQKEKGGKVAAHTEVRLYQKVQGQS
GGVIRVSLPYTKVDIPLVIVFRALGIVPDRDVLNHICFGPNDEALLEYLQPSIEESFAVQ
DRETALDFIGRRGQHEKAPRAQRQRAAFDILHKEFLPHVSTAEGFESKKAYFLGYMVHRL
ISAAMGRKELDDRDHFGNKRLDLAGPLMAEMFGHMFSKLREDMLRYLKKCVETNKPFQLN
TAIRPNSITDGLKYALATGNWGKRGNTRAGVSQVLNRYTFASTLSHLRRTNTPIGRDSKA
AKPRQLHNTHWGMVCPAETPEGAACGLVKNLALMSYISVGSYSAPVMEFLEEWGLEELNE
YQHAPQATKIFVNGVWMGIHRDAPTLHSNLLQMRRGGQLKHEVSIVRDIRERELRLYTDA
GRVCRPLFIVDHPTQSLRLKREHIDRLEEAGEQGALAGAWDQLLSEGIIEYVDAAEEETI
LIAMTSEDLENARRKNSKEELVKDRAAHDFESFDPTARIKSTVFSKQYTHMEIHPSMILG
VCASIVPFPDHNQSPRNTYQSAMGKQAMGVFLTNYQLRMDTMANILYYPQKPLATTRSME
YLKFSELPAGQNAIVAIMCYSGYNQEDSVIMNQSSIDRGLFRSLYYRSYTDTEKMKGMIK
AETIEKPDRNETLRMKHGSSDRYAKLDVDGLVSPATNINGDDILIGKTAPLPEESEELGQ
RTQMHQKRDISTPLKSTEQGVVDQVMLTTNGEGHKFVKIRVRSTRVPQIGDKFASRHGQK
GTIGITYRQEDMPFSAEGLVPDIIINPHAIPSRMTIGHLVEALLSKVSTLTGSEGDATPF
TELTVEAVSKVLRSKGYHSRGFEVLYHGHTGKKLQAQVYFGPTYYQRLKHMVDDKIHARA
RGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCDICG
LMAVANLKKQEFHCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRMYGESD
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgtcacaatcgcaagaaccaaatatgatggatgatgggttctcttatgatccgaattac
gattacactcaggcatccggatcacaacccttaacgcaagattacaaggacgatgtgaag
ttcggtatggacggtatagaggaggaagaggaggaagaagaaccaattagtcaagaagat
tattggacggtgatcaatgctttcttcgatgagaaaggcttagtgagacaacagttggaa
tctttcaatgaatttatcgaaaatacaatgcaggagattgtagatgataattcaaagatg
acgatggatcagttttctcagtatacaggtgtatcaggtgatgaaactaaacgttatgag
atttcattcggacagatttaccttgctagagtcaatcatacggagatggacggtagaacc
aatatgcttttccctcaagaagcgcgtcttagaaatttgacttactcagcgccgttatac
gtcgatatcaagaagagagtacttcaagcttctggtgtagatgatccgatcgaagctgat
tggagacctgctgttggatctgatggtttacctgaaggagtggaggaggataaggcttct
ataggaaaggtccctgtcatggtcagatccaatttctgtcttcttcacaaccttccggat
gaccagtgtcacgatatcggagaatgtcattacgatcagggagggtacttcatcatttct
ggttcagagaaggtattaatcgctcaagagaggatggccacaaaccatgtcttcgtcttc
ttaaaagctgctccttcaagatggacctatttcgcagaaattaacagtcaaaaggagaaa
ggtggaaaggtagctgctcatacggaagtcagattgtatcagaaagtacaaggccagtcc
ggtggtgtcattcgtgtttctctcccctacaccaaagtcgacatcccactcgttattgtc
ttccgagcccttggtatcgtgcccgacagagacgtcctcaatcatatctgttttggtccc
aacgacgaagctttgttagaatacctccaaccatccatagaagaatctttcgcagttcag
gacagagagaccgctttagatttcataggtagaagaggtcaacatgagaaagcacctagg
gctcagcgtcaacgagcagcgttcgatattcttcacaaggagttcctacctcacgtctcg
actgcagaaggtttcgagtcgaagaaagcatacttcctcggttatatggtacataggttg
atttcagccgcgatgggtagaaaggagctagatgatcgagatcatttcggtaataaacga
ttggatttggctggaccactgatggccgagatgttcggtcatatgttctccaagctcagg
gaagatatgttaaggtatttgaagaagtgtgttgagaccaacaaacctttccagctgaac
actgctattcgcccgaacagtatcacagatggtcttaagtacgccctcgccactggtaat
tggggtaaacgagggaatactcgagcgggtgtatcccaagtgctcaatcgatatactttc
gcctccacactttctcacttgcgacgtaccaacactcctatcggtcgtgattctaaagca
gccaagcctcgtcaattgcataacacccattggggaatggtttgtcccgctgagactccc
gaaggagctgcatgtggtctggtcaagaatctcgcccttatgtcgtacatttcagtcggt
tcttactccgctccagtgatggagtttttggaagaatggggtctagaagagttgaacgag
tatcagcatgcacctcaggcgacgaagatcttcgtcaacggtgtttggatgggtattcac
cgagatgctccaacattacattccaacttgttacagatgcgacggggtggtcaactcaag
catgaagtgtcgatagtcagagatatcagagaaagggagttgagattgtatacagatgct
ggtagagtgtgtcgaccgttattcatcgtcgatcaccccacacaatcacttcgactcaag
agggaacatatcgatcgattggaagaagctggagaacaaggtgcattggcaggggcttgg
gatcagttgttatcagaaggtatcatcgaatatgtagatgccgctgaagaggagaccatc
ctcattgcaatgacttcggaagatctagaaaacgcaaggaggaagaacagtaaagaggaa
ctggtgaaagatagagcagcacatgatttcgaatctttcgatccgactgctagaatcaag
agtaccgtgtttagtaaacagtatacccatatggagattcaccctagtatgattttgggt
gtttgtgctagtatcgtacctttccccgaccacaatcaatctcctcgtaacacctatcaa
tctgcgatgggtaaacaagctatgggagttttccttaccaactaccaacttcgtatggac
actatggccaatatcctctactaccctcagaaaccactcgctactactcgatctatggaa
tacctaaaattctctgaacttcccgctggtcaaaatgccattgtcgctattatgtgttac
tctggttacaaccaggaagattccgtcatcatgaatcaatcatcaatcgacagaggtctt
ttccgttcgctatattatcgatcgtacactgatactgagaagatgaaaggtatgatcaaa
gctgaaactatcgaaaagccggataggaatgagaccttgagaatgaaacatggatcaagt
gatagatatgctaaattagatgtggatggcttggtcagtccagcaaccaatatcaacgga
gatgatatcttgattggtaagactgcgccattacctgaagaaagtgaagagctcggtcag
aggacgcaaatgcatcaaaagagggatatctcgacaccactcaagagtacagaacaaggt
gttgtcgatcaggtcatgcttactacgaacggagaagggcataaattcgtaaagattaga
gtcagatcaacacgagtaccccaaatcggtgacaagttcgcttctcgacatgggcaaaag
ggtaccattggtatcacatatcgacaagaggatatgccattcagtgcggaaggtttagtt
ccagatatcattatcaaccctcatgccattccatcccgaatgacaattggacatttggtc
gaagcgttattatcaaaagtatcaactttgactggatccgaaggtgatgctacacccttc
actgaattgaccgtcgaagcggtatcgaaagtcttacgatcgaagggatatcattccaga
ggatttgaagtgttgtaccatggacatacgggtaaaaaattacaggctcaagtttatttc
ggtccgacatattatcaacgattgaaacatatggtcgatgataagattcatgctagagct
cgtggaccccttcagatcctcacgagacaacctgtagaaggtagaagtagagatggtgga
ttgagattcggtgagatggaaagggattgtatgatctcacatggtattgctgggttcttg
aaggagaggatgtatgactcatctgatgccttccgtatacacgtctgtgatatctgtggt
ctaatggcagtagccaacttgaagaaacaagaattccactgttccgtttgtaggaattcc
acgcaaatctcacaggtctacataccttacgcggcgaaattgttgttccaggagcttcaa
gctatgaatatagcgtgccgaatgtacggtgagagtgattaa

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