Kwoniella botswanensis: 90017083
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Entry
90017083 CDS
T11304
Symbol
L199_006099
Name
(RefSeq) uncharacterized protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
kbo Kwoniella botswanensis
Pathway
kbo03018
RNA degradation
kbo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kbo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
90017083 (L199_006099)
09123 Folding, sorting and degradation
03018 RNA degradation
90017083 (L199_006099)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbo03019
]
90017083 (L199_006099)
03041 Spliceosome [BR:
kbo03041
]
90017083 (L199_006099)
Messenger RNA biogenesis [BR:
kbo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
90017083 (L199_006099)
mRNA degradation factors
5'-3' decay
Lsm complex
90017083 (L199_006099)
Spliceosome [BR:
kbo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
90017083 (L199_006099)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
90017083
NCBI-ProteinID:
XP_064747872
LinkDB
All DBs
Position
1:complement(join(16123975..16124007,16124071..16124143,16124273..16124300,16124379..16124499))
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AA seq
84 aa
AA seq
DB search
MASTILPLELVDRCIGSPIWVLMKNEREFTGTLMGFDDYVNMVLKDVKEYEVTPEGITET
ELGQTLLNGNNIAMLIPGGQGPKA
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacaatcttacccctcgaacttgtcgatcgatgtatcggatcaccgatatgg
gtgctcatgaagaatgagagggagttcacggggaccttgatgggttttgatgactatgtt
aatatggtattaaaggatgtgaaagagtacgaggtcaccccggaaggtataacagaaact
gaattaggtcagacattgctgaacggaaacaacatagcaatgctcataccgggtgggcaa
ggacctaaagcgtaa
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