Kwoniella botswanensis: 90017541
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Entry
90017541 CDS
T11304
Symbol
L199_006557
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
kbo Kwoniella botswanensis
Pathway
kbo03030
DNA replication
kbo03410
Base excision repair
kbo03420
Nucleotide excision repair
kbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
90017541 (L199_006557)
03410 Base excision repair
90017541 (L199_006557)
03420 Nucleotide excision repair
90017541 (L199_006557)
03430 Mismatch repair
90017541 (L199_006557)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbo03032
]
90017541 (L199_006557)
03036 Chromosome and associated proteins [BR:
kbo03036
]
90017541 (L199_006557)
03400 DNA repair and recombination proteins [BR:
kbo03400
]
90017541 (L199_006557)
DNA replication proteins [BR:
kbo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
90017541 (L199_006557)
DNA Replication Termination Factors
ELG1-RFC complex
90017541 (L199_006557)
Chromosome and associated proteins [BR:
kbo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
90017541 (L199_006557)
DNA repair and recombination proteins [BR:
kbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
90017541 (L199_006557)
Check point factors
HRAD17(Rad24)-RFC complex
90017541 (L199_006557)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
nSTAND3
RCF1-5-like_lid
AAA_3
AAA_16
Gp44_lid
Viral_helicase1
RuvB_N
nSTAND_NTPase5
Mg_chelatase
DNAX_ATPase_lid
NTPase_1
Rad17
MeaB
AAA_assoc_2
AAA_19
FtsK_SpoIIIE
AAA_5
RNA_helicase
NB-ARC
SRP54
AAA_18
KTI12
Motif
Other DBs
NCBI-GeneID:
90017541
NCBI-ProteinID:
XP_064748328
LinkDB
All DBs
Position
1:complement(join(17312624..17312740,17312850..17313176,17313311..17313506,17313648..17313749,17313853..17313959,17314068..17314179,17314278..17314369))
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AA seq
350 aa
AA seq
DB search
MASSSSTTAKGKETVSATAKHTDAEGYEMPWVEKYRPVLLDDIVGNTETVERLKVIAEDG
NVPHIIISGMPGIGKTTSIHCLAHALLGDAYKEGVLELNASDERGIDVVRNKIKSFAQRK
VTLPPGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMSNKIIEPIQSRCAI
LRYSKLRDAEVLKRLKEICQMEDVKYNDQGLAALIFTAEGDMRQAINNLQSTYSGFGFVS
QDNVFKICDQPHPIVIRQMIKDCQNGLVDDALARINDLWDQGYSAVDIVVSVFRVTKTMD
ELQEYMKLEFIREIGWTHMRILEGVGTLVQLGAMVARLCKLSLPPQALKI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcatcttccaccactgcaaaggggaaagagaccgtatcggccactgcaaag
cataccgatgcagaggggtatgagatgccatgggtcgagaaatacagacccgtattgttg
gatgatatagtaggaaatacagagacagtagagaggttgaaggtcattgctgaagatggg
aatgtacctcatattatcatatctggcatgccaggtatcggtaaaaccacatctatacat
tgtctggcacatgcccttttgggcgatgcgtataaggaaggtgtattggaattgaacgct
tctgatgagagaggtatagacgtagttcgaaataagattaaatcgttcgctcagaggaaa
gtgactttacctcctggtagacataagatcatcattctagatgaagctgattctatgaca
gcaggagctcaacaagctcttcgaagaactatggaaatatattccaacaccacccgattc
gcattagcttgtaatatgtcgaataagattatagaacctatccaatcgcgatgtgcgata
ttgaggtattcgaaattgagagatgcagaggtgttgaagaggttgaaagagatttgtcaa
atggaagatgtaaaatacaatgatcaaggtcttgccgctctgatcttcaccgctgaagga
gacatgcgtcaagcgataaacaaccttcaatcgacctattcaggattcggattcgtctct
caggataatgtatttaagatctgtgatcaacctcatccgattgtaattagacaaatgatc
aaagattgtcagaatggtttggtggatgatgccctagctagaatcaatgatctatgggat
caaggttattcggcggtagatattgtggtttcggttttcagggttacgaagacgatggat
gagttgcaggagtatatgaaattggaatttatcagggaaatcggctggactcacatgagg
atcttggaaggagtgggaacactcgttcagctaggtgcgatggtagctagattatgtaaa
ttgagtttacctcctcaagcgttgaagatatga
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