Kwoniella botswanensis: 90019096
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Entry
90019096 CDS
T11304
Symbol
L199_008112
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
kbo Kwoniella botswanensis
Brite
KEGG Orthology (KO) [BR:
kbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbo03021
]
90019096 (L199_008112)
03036 Chromosome and associated proteins [BR:
kbo03036
]
90019096 (L199_008112)
Transcription machinery [BR:
kbo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
90019096 (L199_008112)
Chromosome and associated proteins [BR:
kbo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
90019096 (L199_008112)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_9
SH2
Tex_YqgF
HHH_3
Motif
Other DBs
NCBI-GeneID:
90019096
NCBI-ProteinID:
XP_064749867
LinkDB
All DBs
Position
3:complement(join(607855..608060,608140..608449,608513..608652,608725..609904,609967..610143,610198..610800,610859..611191,611251..611396,611453..611609,611677..612438,612497..612623,612680..613284))
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AA seq
1581 aa
AA seq
DB search
MSSRSASPEGEGEEIRPYGDDRDSSEEESEDDPEEAKRIAEGFIVDEEDDDAEEEEDEEE
RERRRKERKKRKKREKLRAKRERQREDLELSEDELELLQENRGLTGSSQSRPIKRIRRDG
SLDDEDDDRRGEPTLQDMFRDDEDRDRDDDEDDLGDFIEEDEDDLAAQGETEDQRRERKR
EEKLKRRQQKASKPELAGVDRASWDEIYAVFGDGQDYDWALEGEDGMDLDEDEEAAKKDL
RLEDVFDPAEIKARRLQDEDRAIANNDRPERHQLVNSTLSDNPVFAPDSLYPPPDLAAGW
AHTKISLRTQYIFCGMHEEGSYPEPTIDNPQPYAAFRRIELANEFRNAVSTALNMMFVQH
LEVPYLWHYKRDAFSLLENQGQSSVQFLERDELWSLYNLGIKFRAIFERNQQTQLSWEKI
KARKPDLQDEYLTTKLLPSICMMSVESAAEGSDWLSYHYASDLKAIKEDEAVEEGAKRLP
ERGENEDLRTGPIMKLVEAFGISVPQVATTFNEPEGQPIPPKNAEKLPNDLAEEFSGSGT
AFGSPEIALQAASQILTTEFSKDPAIRQQTRDFMEACGVVSVTPTDRGMNIIDEYHLYYN
FKFLTRKPVQMFKDSPQFLHMLKAEEEGLITITIEADESQVQSFVETLVRCCRSNDYGEI
STAWNALRAEICSDVTRKYLVPSAAKWLKEHLKSEADEFVAERCRLELELRVNVRPFASS
DMDQGETPSVLALTNGKGEIRDAIMAVMLDDDGNIRTQTKFDNLRDELDKNAFVELVEKR
KPKVVVIGGMSVQAARLRDDAASALRELAIRAYGQNPPVSEAYGQYEQYQADLADFDQKL
ASYLIPLIFVNDATARLYMNSEEAEKEFPNLPLNGRYALGLARYTQNPLNAYAKLGKQIA
SVIFMEHHQKLINPEKLLIHLERGLVNSVCFMGIEINSCVADAYQRSMLPFISGLGPRKA
DALVHGIHKQGSLLNRLAFSDLGLFGPTIFENVAGFLTIENDLKDMMLEPENPQEQPDPL
DMTRIHPEDYEFAQKMCQDALDLDVEDVTDRHKSEVVQTLMLDDKRAQKLGELNLDDFAF
NLQRQGEGNKRHTLGEIVNELIRYRADRRPGFYVPSEWEVVTMLTGETERTIGRGLKVTA
TVRKALSARVFCQLESGMDAILERDYVADDDQPPVTSCEEFFKPRQAVKAVVIQAEPNRF
QVKISTRASDLRQAVAFIPPFRDEPYNDLVRKSAAEDAAAAKKRRQAGKIKRVVNHPNWH
VMNSGQAEQFLASQHRGDVVIRPSSKGSDHLAVTWKVDEDIYQHIDVQEIDKPNEYSLGR
ILRVAGRYSYSDLDELIINHVKAMARKLDELQLHEKYKPEDDLEAYLKNYVQAHPGRSMY
GFSIDSDRPGYIKLCFLNKSTRDGGVIQTWPVQVLPGAYKLNNAEVPGVTELCNAFKLQY
SARLAEQGSGGKTPGIRLGKTPLPGGRTPGGRTPALGGRTPALGGRTPMPGAAGGLQGMG
RTPMQQPGMTPNPYGAPIPQQGYGMPSNGYGRPPPQAGYGMPPSNGGGYGRQPPGQGYGG
MTPGGAPGPSAGAPGMNADRA
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgctccgcctcgcccgagggtgaaggcgaggagatccgaccgtatggcgac
gatcgagattcgtcagaagaggaatcggaggatgatccagaggaggctaagaggatagcc
gaggggttcatagtggatgaagaggatgacgatgcagaagaagaagaggacgaggaggag
cgggagagacgtaggaaagaacgcaagaagaggaagaagagggagaagctcagagctaag
agggagagacaacgtgaagatttggaactttccgaagacgaattggaactcttacaggaa
aatagaggactgaccggctcatctcaatctagacctatcaagaggatacgaagggatgga
tcgttagatgatgaagatgatgataggaggggtgaaccgaccctacaggatatgttcaga
gatgatgaggatagggatagggatgacgacgaggatgatctgggagatttcatagaagag
gatgaagatgatttagctgctcagggcgaaacggaagatcaaagaagggagagaaagaga
gaagagaaattgaagagaagacagcagaaagcttcgaaacctgaattagcaggtgtcgat
agagcgtcgtgggatgagatatatgctgtgtttggagatggacaagattacgattgggca
ttggaaggtgaagacggcatggatctggatgaggatgaggaggcagcaaagaaagatcta
aggttagaagacgtatttgaccctgctgagatcaaagcccgtcgtttacaagatgaagat
cgagctatagcgaataatgatcgaccagaacgacatcaacttgttaattccacattatcg
gataatcctgtattcgctcctgactcgctatatcctccgcctgacttggcagctggttgg
gcacataccaagatatcacttaggacccaatacatattctgtgggatgcatgaagaagga
tcataccctgaaccaactatcgataaccctcaaccatatgctgcctttcgtcgtatagaa
ctagccaacgaattcagaaatgcagtttcaacagcattaaatatgatgtttgtccaacac
cttgaagtaccctacttatggcattacaagagagacgcctttagtttattggaaaatcaa
ggtcaatcatcagtacagttcttggaaagagacgaattgtggtcattgtacaacctcggt
atcaagtttagagcgatattcgaaaggaatcagcagactcaactatcatgggagaagatc
aaagctcgtaaacctgatttacaagatgaatatctgacaacaaagttacttccttcgata
tgtatgatgagtgtagaatcagctgcggagggctcagattggttgtcataccattatgcc
tcggatctgaaagcgataaaggaggatgaagctgttgaagaaggtgcgaagagattaccg
gaacgaggagaaaatgaggatctgagaacaggaccgatcatgaaattggttgaggcattc
ggcatctcagtaccgcaagtagcaacgacgtttaacgaacccgaagggcagcccataccg
cccaagaacgcagagaagctgcctaacgatttggcagaggagttttctggatcagggacc
gctttcggatcaccagaaatagctttacaggctgccagtcaaatcctcactacggaattc
tcgaaggaccctgctatacgtcagcagacgagagatttcatggaagcatgtggtgtggta
agtgtaacaccgacggatagggggatgaacataatagatgaataccacctgtattacaac
ttcaaattccttacccgtaaacccgtacaaatgttcaaagattcccctcaattcttacac
atgctcaaggccgaagaagaaggtttgataacgatcaccatcgaagcagatgaatcgcaa
gtgcagtcattcgtggaaacgttggttaggtgttgtcgatcgaatgactatggagagata
tcaactgcttggaatgctctacgagcggaaatatgctcagatgtgacgaggaaatacctc
gtaccgtctgcggctaaatggttgaaggagcatctcaagagtgaagcggatgagttcgtg
gctgagaggtgtcgtctcgagcttgagctccgagtaaacgtcagaccgttcgcttcttcc
gatatggaccaaggcgaaactccatctgttttagcattgaccaatggtaaaggtgaaatc
cgggatgctatcatggccgtgatgttagatgatgacggaaatatccggactcagaccaaa
tttgataatctcagggacgaattggacaagaatgctttcgtggaactagtggaaaagagg
aaacctaaagttgtcgttatcggaggaatgtccgtgcaagctgcaaggttacgagatgat
gctgcatcggcattacgagaattagcgatcagagcctatgggcagaatccacctgtgtca
gaggcatatggacaatacgaacagtatcaagcggatttggcggatttcgatcagaaattg
gcttcttacctcatccctctaatcttcgtcaacgatgctaccgcaagattgtacatgaac
tcggaagaagctgaaaaggagttcccgaatttacctctgaatggacgatacgctttaggt
ctggctagatacactcagaatccactcaatgcctatgccaagttgggtaaacagatagct
tcggtgattttcatggaacatcatcagaaattgatcaatcctgaaaagctgttgatacac
ctcgaaaggggtttggtcaactctgtctgtttcatgggtatagaaatcaattcttgtgta
gcagatgcttatcagaggtcaatgttaccgttcatctctggccttggacccagaaaagca
gatgctttggtacatggtatacataagcagggctctctcctcaaccgactggcgttctct
gatcttggtctattcggtcctacaatatttgagaacgttgctggtttcctgactatcgag
aatgatctcaaagatatgatgctggaacctgaaaaccctcaagaacagccagatccattg
gatatgactcgaatacatcctgaagattatgaattcgctcaaaagatgtgtcaagatgcc
cttgatctcgatgttgaagacgttaccgatcgacacaagtctgaggtcgtgcagactctt
atgttagatgacaagcgagctcaaaaacttggtgaattgaatttggatgatttcgcattc
aacttgcagcgtcaaggagaagggaacaaacgacatactctgggagaaattgtcaatgag
cttatccgatatcgagctgatcgaaggcctggattctacgtaccgtcagaatgggaagta
gtcactatgttaacgggagagactgaacgtacgattggtagaggtctaaaggtcactgca
actgtccgtaaagctttgtcggcgagggtgttctgtcaactggaatcaggcatggacgct
attttagaacgagactacgtagcagatgacgatcaaccacctgtgacatcttgcgaagag
ttcttcaagcctcgtcaagctgttaaagcggtggtcattcaagctgaacccaatcggttc
caagtgaagatctcaacgcgagcatcggacttacgacaggcagtagctttcattcctcca
ttccgagatgaaccctacaacgaccttgtaaggaaatcagcagcggaagacgcggccgct
gccaagaaaagacgacaagctggaaagatcaagcgtgtggtcaatcatcctaattggcat
gttatgaattccggacaggcggaacaattcttagcatcgcaacatcgtggtgatgtggtt
atcagaccttcgtccaagggatcagatcacttggcagtaacgtggaaagtcgatgaagat
atctatcagcatattgatgtacaggaaatcgataaaccgaatgaatattccctcggaagg
atattgagagtagctggtagatattcgtattcggatttagatgagttgatcataaatcac
gttaaagcaatggcaaggaaattggatgaattgcaattacatgagaaatacaaacctgaa
gatgatcttgaggcgtatttgaagaattacgttcaagctcatcctggtagaagtatgtat
ggattctcgatcgattcggatagacctggttatatcaaactgtgtttcctgaataagtcg
acgagggacggcggtgtgatacaaacatggcccgtccaagtccttcctggagcgtacaaa
ctcaacaacgccgaagtgcccggtgtgaccgaattgtgtaatgccttcaaattgcagtat
tccgctagactcgctgaacaaggtagtggaggaaagacacctggtatcagattgggtaag
acccctcttcctggaggaaggacacctggtggtagaacgcctgctttaggaggtaggaca
cctgcattgggtggaaggacacctatgcctggtgctgctggtggactccaggggatgggt
aggacgccaatgcagcagcctgggatgactcctaatccttatggcgcaccgataccccaa
cagggatacggaatgccttctaacggctatggtcgaccaccacctcaagcaggatatggg
atgcccccttcgaatggaggtgggtacggacgtcagcctcccggacagggttatggcggt
atgacacctggtggtgcacctgggcctagtgccggagcgccagggatgaatgctgataga
gcgtga
DBGET
integrated database retrieval system
