Kutzneria buriramensis: Q4V65_16085
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Entry
Q4V65_16085 CDS
T10787
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kbr Kutzneria buriramensis
Pathway
kbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q4V65_16085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kbr03019
]
Q4V65_16085
03400 DNA repair and recombination proteins [BR:
kbr03400
]
Q4V65_16085
Enzymes [BR:
kbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q4V65_16085
Messenger RNA biogenesis [BR:
kbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q4V65_16085
DNA repair and recombination proteins [BR:
kbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q4V65_16085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_30
HEM4
PglZ_C
Motif
Other DBs
NCBI-ProteinID:
XIF76392
LinkDB
All DBs
Position
3456615..3458702
Genome browser
AA seq
695 aa
AA seq
DB search
MDDLALREQAEEHLRSLAGPEAKLRDDQWTAISALVSQRRRALVVQRTGWGKSAVYFIAT
ALLRSLGEGPTVIVSPLLALMRNQVEAAARAGVRAATINSANLGKWQEVQDAVTAGDVDV
LLVSPERLNNPDFRDNVLPSLTASAGLLVVDEAHCISDWGHDFRPDYRRLRTLLGELPEG
VPVLATTATANDRVVRDVADQLGIGGTQTLVLRGPLDRESLHLAVVTLPSPAARLGWLAE
KLTELPGSGIIYTLTVSAAEDVASFLRERGFEVAAYSGKTDPAERERAEADLLANRVKAL
VATSALGMGFDKPDLGFVVHLGAPQSPIAYYQQIGRAGRGVQRAEVLLLPGREDRDIWQY
FASLAFPPEHIVRQVLDALAGSDRPLSTAALEPMVELSRSRLEVVLKVLDVDGAVHRVRG
GWVSTGGPWHYDGERYGRLGEARRAEQQAMLDYQATDGCRMEFLLRQLDDPTAAPCGRCD
NCTGRRWSVEVSGQASTAAQDRLNRPGVEIAPRRMWPSGMSGLGVPLSGKIPAGQQAEEG
RALGRLTDIGWGNRLRDLLAENTPDQPVPDDVFQACVQVLAAWKWSQRPSGVVTIGSRRR
PKLVASLGERLASIGRLTYLGEVTSAGEGSRRSNSAQRLAGLWQGLRAPESLAADGPVLL
VDDLVDSGWTMTLAARLLREGGAPAVLPFALAVTN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctggccttgcgcgagcaggcagaggagcacctccgatccctcgccggaccg
gaggcgaaactccgtgacgaccagtggacggcgatcagcgcactggtgtcgcagcgtcgg
cgcgcgctggtcgtgcagcgcacggggtggggcaagtcggcggtgtacttcatcgcgacg
gcgctgctgcgttccctcggcgagggcccgacggtgatcgtctcgccgttgctggccctg
atgcgcaaccaggtggaggcggcggcccgcgcgggggtccgggcggcgaccatcaactcc
gccaacctcggcaagtggcaggaggtccaggacgccgtcacggccggcgacgtggacgtg
ctgctggtcagcccggaacggctgaacaacccggacttccgcgacaacgtgctgccgagt
ctgaccgcgagcgccggcctgctcgtggtggacgaggcccactgcatctccgactggggc
cacgacttccgtcccgactaccgccgcctccgcacacttctgggtgaactgccggaaggt
gtgccggtgttggcgacgacggcgaccgcgaacgaccgcgtggtccgggacgtcgccgac
cagttgggcatcggcggcacgcagacgttggtgctgcgcggcccgctggaccgggagagc
ctgcacctggccgtcgtcacgctgccgagcccggcggcccggctggggtggctggcggag
aagctgacggagctccccggctccggcatcatctacacgctgacggtgtcagcggccgag
gacgtggcctcgttcctgcgcgagcgcggcttcgaggtggcggcgtactccggcaagacc
gacccggccgaacgcgaacgtgccgaggcggacctgctggcgaaccgggtgaaggcgctg
gtggcgacctcggcgctgggcatgggtttcgacaagccggacctgggattcgtggtgcac
ctgggcgcgccgcagtcgccgatcgcgtactaccagcagatcggccgcgccggccggggc
gtgcagcgcgcggaggtgctgctgctgccgggacgcgaggaccgggacatctggcagtac
ttcgcgtcgctggccttcccgccggaacacattgtgcggcaagtgttggacgccctcgcg
ggcagcgaccgtccactgtcgacagcggcactggaaccgatggtggagctgtcgcggagc
cggctcgaagtcgtgctcaaggtgttggatgtggacggcgcggtgcaccgggtgcgcggc
ggctgggtgtcgacgggcgggccgtggcactacgacggggagcgctacggccggctcggc
gaagcgcggcgggccgagcagcaggcgatgctcgactatcaggcgaccgacggctgccgc
atggaattcctgttgcggcagctggacgatccgacggcggcgccgtgcgggcggtgcgac
aactgcacgggccggcggtggagcgtcgaggtgtccgggcaggcatcgacggcggcgcag
gaccggctcaaccggccgggcgtggagatcgcgccgcgccggatgtggccgagcggcatg
tcgggcctgggcgttccgctgtcgggaaagatcccggcgggccagcaggccgaggagggt
cgggccctgggccggctgaccgacatcggctggggcaatcgcctgcgcgacctgctcgcg
gagaacaccccggatcagccggtgccggacgacgtgttccaggcgtgcgtgcaggtgctc
gccgcctggaagtggtcgcaacggccgtcgggcgtggtgacgatcggctcgcgccggcgg
ccgaaactcgtcgccagcctgggtgagaggctggcgtcgatcggccggctgacctacctc
ggcgaggtcacctcggccggcgagggcagccggcgcagcaacagcgcgcagcggctggcc
ggtctgtggcaggggctgcgcgcgccggagtcgctcgccgccgacgggccggtgttgctg
gtggacgatctggtggacagcggctggacgatgacgctcgccgcacgactgctccgggaa
ggaggcgcgcccgcggtgctgccgttcgccctggcggtcacgaactag
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