Kutzneria buriramensis: Q4V65_25420
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Entry
Q4V65_25420 CDS
T10787
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kbr Kutzneria buriramensis
Pathway
kbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q4V65_25420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbr03400
]
Q4V65_25420
Enzymes [BR:
kbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Q4V65_25420
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q4V65_25420
DNA repair and recombination proteins [BR:
kbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q4V65_25420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
XIF78143
LinkDB
All DBs
Position
complement(5463625..5464488)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALAHHLREFAVGRTVARVDVASLSVLKTASPPWTDLHGREVTGAGRHGKHLD
LDCDGLHLIVHLARAGWLRWANTLSAAPPKPGKGPLALRVHLGPPGQGPGFDLTEAGTKK
GLAVWIVKDPAEVPSIARLGPDALSLDRDALAALFRGRTERLKTALTDQTLLAGVGNAYS
DEIMHTAQLSPYATAGKLDDNALDRLHSALHSVLTDAVTRSVGQGSATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaactgcccgaggtcgaagcgctcgcgcaccacctgcgcgagttcgctgtcggc
cgcacggtggcgcgggtggacgtggcgtcgctgtcggtgctcaagacggccagcccgccg
tggaccgacctgcacggtcgggaggtcaccggcgccggccgccacggcaagcacctggac
ctggactgcgacgggctgcacctgatcgtgcacctggcccgtgccggctggctgcgctgg
gccaacacgctgtcggccgccccgcccaagcccggcaaggggccgctggcgctgcgcgtg
cacctcgggccgccggggcaggggccgggcttcgacctgaccgaggccggcaccaagaag
ggcctggcggtgtggatcgtcaaggacccggcggaggtgccgagcatcgcccggctcggc
ccggacgccctgtcgctggaccgggacgcgctggccgcgctgttcaggggccgcaccgag
cggctcaagaccgccctgaccgaccagaccctgctcgccggcgtcggcaacgcctactcc
gacgagatcatgcacaccgcccagctctcgccctacgcgaccgccggcaagctcgacgac
aacgccctggaccggctgcactcggcgctgcacagcgtgctcaccgacgccgtgacccgg
tcggtgggccagggctcggccacgttgaagggcgagaagcgctccggcctgcgggtgcac
gcccggaccgggctgccctgcccggtctgtggcgacaccgtccgcgaggtctccttcgcg
gacaagtcgttccagtactgcccgacctgccagaccggcggcaagccgctggccgaccgc
cggctgtcgaggctactcaagtaa
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