Kutzneria buriramensis: Q4V65_34475
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Entry
Q4V65_34475 CDS
T10787
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kbr Kutzneria buriramensis
Pathway
kbr03030
DNA replication
kbr03430
Mismatch repair
kbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4V65_34475 (dnaE)
03430 Mismatch repair
Q4V65_34475 (dnaE)
03440 Homologous recombination
Q4V65_34475 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kbr03032
]
Q4V65_34475 (dnaE)
03400 DNA repair and recombination proteins [BR:
kbr03400
]
Q4V65_34475 (dnaE)
Enzymes [BR:
kbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4V65_34475 (dnaE)
DNA replication proteins [BR:
kbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q4V65_34475 (dnaE)
DNA repair and recombination proteins [BR:
kbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q4V65_34475 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
XIF79842
LinkDB
All DBs
Position
7357476..7361012
Genome browser
AA seq
1178 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAAKLKDMFAECNRLGMPAAAITDHGNMYGAYDFFKQATAAG
VKPIIGIEAYMAPGSRHDKRRITWGEPHQKNDDVSASGAYTHQTIWAASNEGLHNLMRAS
SYASIDGQLGKWPRMDRELLAENSKGLIATTGCPSGEVQTRLRLGQEKEALQAASDWKDI
YGDGNFFVELMDHGIEIESRVRDGLVNVAKQLNLPFVVTNDSHYTYESDRDAHGVLLCVQ
TGKTLQDPTRFKFDGTGYYLKSPDEMRAIDSSDPWQEGCRNTLLVAEKVDTTDMFKFHNL
MPRFPIPEGMTEDEYFKEQVWAGMHRRFPDGIDEEHRKQVEFEIGVILQMGFPAYFLVVA
DFINWAKNNGIRVGPGRGSAAGALIAYAMGITDLDPLAHGLIFERFLNPDRVSPPDIDID
FDERRRGDVIRYVTEKWGEDKVAQVITFGTIKAKAAIKDSARVLYGQPGYAVADRISKAY
PPAVMAKDIPLNGLFDPQHKRYAEATEIRALYEQDPQVKEIIDTGRGLEGLIRNAGVHAC
AVIMSAETLTDHIPVWKRPQDGSIITQFDYPTCETLGLLKMDFLGLRNLTVIDDTMKNIK
LNGKTPPDLDSLALDDKKTYELLGRGDTLGVFQLDGGPMRDLLRLMRPDNFEDISAVGAL
YRPGPMGAKSHTNYALRKNKQQEITPIHPALEEPLKDILGTTYGLIVYQEQVMAIAQKLA
GYTLGQADLLRRAMGKKKKEILDKEYAGFEKGMLDNGYPQDAVKTLWEILVPFADYAFNK
AHSAAYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLAECRKMGITVLPPDVND
SMREFAPVGDSIRFGLGAIRNVGANVVDSIVAARTQKGAFVDFSDYLRKVDANACNKKVI
ESLIKAGAFDSLGHPRKGLHMVHIEAVDAIMDTKKAEAVGQFDLFGGGDDGEDNAGGVFD
VKVPDEQWDSKHQLTLEREMLGLYVSGHPLNGVERVLEAQSDTAIATILEGNLPDGAQVT
VGGILASVTRRINKSGESWASAQLEDLAGGIEVLFFPKTYSVVGMSVAEDAIVLVKARIA
KRDDRISLIANDLALPDLEMAASGMPVKLTMHAAKCTRPLVGQLKEVLKSHPGSTEVHLN
LMNGRRGTMLRLDDGLRVDPSPSLMGDLKALLGPGCLG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcgttcgtgcacctgcacgtgcacaccgagtactcgatgctcgacggggcc
gccaagctcaaggacatgttcgccgagtgcaaccggctgggcatgccggcggccgcgatc
accgaccacggcaacatgtacggggcctacgacttcttcaagcaggccaccgccgccggg
gtgaagccgatcatcggcatcgaggcgtacatggcgccgggctcccgtcacgacaagcgg
cgcatcacctggggcgagccgcaccagaagaacgacgacgtgtcggccagcggcgcctac
acccaccagacgatctgggcggccagcaacgagggcctgcacaacctgatgcgggcctcc
agctacgcgagcatcgacggccagctgggcaagtggccgcggatggaccgggagctcctg
gcggagaactccaagggcctgatcgccaccaccggctgcccgtcgggcgaggtgcagacc
cggctgcggctcggccaggagaaggaggccctgcaggcggcctcggactggaaggacatc
tacggggacggcaacttcttcgtggagctgatggaccacggcatcgagatcgagagccgg
gtccgcgacggcctggtcaacgtggccaagcagctcaacctgccgttcgtggtgacgaac
gactcgcactacacctacgagtcggaccgggacgcgcacggcgtgctgctgtgcgtgcag
accggcaagacgctccaggacccgacccgcttcaagttcgacggcacgggctactacctg
aagtcgccggacgagatgcgcgcgatcgactcctcggacccctggcaggaggggtgccgc
aacacgctgttggtggccgagaaggtcgacaccaccgacatgttcaagttccacaacctg
atgccgcggttcccgatccccgagggcatgaccgaggacgagtacttcaaggagcaggtg
tgggccggcatgcaccgccggttccccgacggcatcgacgaggaacaccgcaagcaggtg
gagttcgagatcggcgtcatcctgcagatgggcttcccggcctacttcctcgtggtcgcc
gacttcatcaactgggccaagaacaacggcatccgggtcggcccgggccgtggctccgcc
gcgggggcgctgatcgcgtacgcgatgggcatcaccgacctggacccgttggcccacggc
ctgatcttcgagcggttcctcaaccccgaccgcgtcagcccccccgacatcgacatcgac
ttcgacgagcgccggcgcggcgacgtcatccgctacgtcaccgagaagtggggcgaggac
aaggtcgcccaggtgatcaccttcggcaccatcaaggcgaaggcggcgatcaaggactcc
gcccgcgtgctctacggccagcccggctacgcggtcgccgaccggatctccaaggcctac
ccgccggccgtgatggccaaggacatcccgctcaacggcctgttcgacccgcagcacaag
cgctacgccgaggccaccgagatccgcgccctctacgagcaggacccgcaggtcaaggag
atcatcgacaccggccgcggcctggagggcctgatccgcaacgccggcgtgcacgcctgc
gcggtgatcatgtccgcggagacgctgaccgaccacatcccggtgtggaagcggccgcag
gacggctcgatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaag
atggacttcctggggctgcgcaacctcacggtcatcgacgacacgatgaagaacatcaag
ctcaacggcaagaccccgccggacctggacagcctggcgctggacgacaagaagacctac
gagctgctgggccggggcgacacgctgggcgtgttccagctggacggcgggcccatgcgc
gacctgctgcggctgatgcgcccggacaacttcgaggacatctccgcggtcggcgcgctc
taccggccgggcccgatgggcgccaagtcgcacacgaactacgcgctgcgcaagaacaag
cagcaggagatcaccccgatccacccggcgctggaggagccgctcaaggacatcctcggc
accacctacggcctgatcgtgtaccaggagcaggtcatggccatcgcgcagaagctggcc
ggctacacgctgggacaggccgacctgctgcgccgcgcgatgggcaagaagaagaaggag
atcctggacaaggagtacgccggcttcgagaagggcatgctggacaacggctatccgcag
gacgccgtcaagaccctctgggagatcctggtccccttcgccgactacgccttcaacaag
gcgcactcggccgcgtacggcctggtctcgtactggaccgcctacctgaaggcgaactac
ccggccgagtacatggccggcctgctcacctcggtcggcgacgacaaggacaaggccgcg
atctacctggccgagtgccgcaagatgggcatcaccgtgctgccgccggacgtcaacgac
tcgatgcgcgagttcgcgccggtcggcgacagcatccggttcggcctgggcgcgatccgc
aacgtcggcgcgaacgtggtcgactcgatcgtggcggcccgcacccagaagggcgcgttc
gtcgacttctccgactacctgcgcaaggtcgacgccaacgcctgcaacaagaaggtcatc
gagtcgctgatcaaggccggcgccttcgactcgctgggccacccgcgcaagggcctgcac
atggtgcacatcgaggccgtcgacgcgatcatggacaccaagaaggccgaggcggtcggc
cagttcgacctgttcggcggcggggacgacggcgaggacaacgccggcggcgtgttcgac
gtgaaggtgcccgacgagcagtgggactccaagcaccagctgacgctggagcgggagatg
ctcggcctgtacgtgtccggccacccgctcaacggcgtggagcgggtgctggaggcccag
tccgacacggcgatcgccaccatcctcgaaggcaacctccccgacggcgcgcaggtgacg
gtcggcggcatcctggcctcggtgacccggcgcatcaacaagtccggcgagtcgtgggcg
tccgcgcagctggaggacctggccggcggcatcgaggtgctgttcttcccgaagacctac
tcggtggtcgggatgagcgtcgccgaggacgcgatcgtgctggtcaaggcccgcatcgcc
aagcgcgacgaccggatctcgctgatcgccaacgacctggcgctgccggacctggagatg
gcggccagcggcatgccggtgaagctgaccatgcacgcggccaagtgcacccggccgctg
gtgggccagctcaaggaggtcctcaagtcgcacccgggctccaccgaggtgcacctgaac
ctgatgaacggccggcgcggcaccatgctgcgactggacgacgggctgcgggtggacccg
tcaccgtcactgatgggcgacctcaaggccctgttgggaccgggttgcttgggctga
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