Kutzneria buriramensis: Q4V65_41300
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Entry
Q4V65_41300 CDS
T10787
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kbr Kutzneria buriramensis
Brite
Enzymes [BR:
kbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Q4V65_41300 (hrpA)
Messenger RNA biogenesis [BR:
kbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q4V65_41300 (hrpA)
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
XIF81112
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Position
8891485..8895381
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AA seq
1298 aa
AA seq
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MTAAHIELPQLMLRDEHRLRRRVDGARKIRDEAKRNAALAQIDHEVLAAQARLAARVAAV
PRIDYPEELPVSQRRQDILDVIRDNQVVIVAGETGSGKTTQLPKICLELGRGLRGVIGHT
QPRRIAARTVAERVAEELHTELGKVVGYKVRFTDQVGDDTLVKLMTDGILLAEIQSDRLL
SRYDTLIIDEAHERSLNIDFILGYVKQLLPRRPDLKVIITSATIDPERFSRHFGDAPIVE
VSGRTYPVETRYRPVIDPEDPDADPDRDQVQAIVDAVDELQAEGPGDILVFLSGEREIRD
TADALSKQDLRNTEILPLYARLSVGEQHRVFQRHTGRRVVLATNVAETSLTVPGIKYVID
PGNARISRYSHRLKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFESRPEFTD
AEILRTNLASVILQMIAAGLGDIAAFPFIDPPDRRNINDGIGLLQELGALENGKLTGIGR
RLSQLPVDPRLARMVVAAEENGCVREVMVIAAALSIQDPRERPTEQQEQAQQQHARFRDP
DSDFISFLNLWNYLREQQKELSSNQFRKMCRAEFLNYLRVREWQDIYSQLRQVVKGQGVS
VNGGEIDTKGIHLSLLAGLLSHLGMKDVITKGVPTKGSIRKGPTEYLGARGAKFAIFPGS
ALSRQQPQWVMAAELVETSRLWARTVAKIEPEWAEKLGAHLVKRSYSEPHWEARQGAVIA
TEKVTLYGLPIVAARRINYGRIDPEVSRELFIRHALVDGEWRTSHQFFHHNRKLLDDVEK
LEDRVRRRDIKVDDETLFDFYDKRVGAEVVSVRHFDTWWRKTRREQPDLLTFDPEMLVND
SAGGITEADYPDHWTQGGVQLPLTYRFEPGRRDDGVTVRVPLPVLGQVDGDGLAWQIPGL
RLELVTSLIKSLPKQLRKNFVPVPTFAKAVVDRIGADDQHVLEAVERELRTLSGVAIPRE
AWQLDQVPEHLKTTFHVVDEGDRTLAAGKDLAAIKEDLRATMRAALSAAPNDIERTGLTT
WDFGTLPRTHRQAVTGYEVTTYPSLVDRGDHVDVKLLDSAAQQRAAMKLGTRRLLLLQLP
SPVKLIVRSLSNDAKLTLSRNPHGGVPALLADCAATAVDKLVADGGGPVFDQAGFEKLLV
RARQGLNETVLEVVKRVRKVLDAAQAAERQLAATKFAPDASVADIRAQLRDLVHADFAQE
TGYQRLPDVERYLRAIERRLDKLPENPQRDVQRTEEIAEITAEYRALVDAVPDGEPVEAP
LRSIGWMIQELRVSYFAQTLGTAYPVSEKRIYKAMDEL
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctgcccacatcgaactgccccagctgatgctgcgcgacgagcatcggctgcgt
cggcgtgtcgacggggcccgcaagatccgcgacgaggcgaaacgcaacgccgcgctggcc
cagatcgaccacgaggtgctcgccgcgcaggccaggctggccgcccgggtggccgcggtg
ccgcggatcgactacccggaggagctgccggtcagccagcgccgccaggacatcctggac
gtgatccgggacaaccaggtggtcatcgtggccggcgagaccggttccggcaagacgacc
cagctgcccaagatctgcctggagctgggccggggcctacgcggtgtgatcggccacacc
cagccgcgccggatcgcggcccgcacggtggccgagcgggtggccgaggagctgcacacg
gagctgggcaaggtcgtcggctacaaggtccggttcaccgaccaggtcggcgacgacacg
ctggtcaagctgatgaccgacggcatcctgctggccgagatccagagcgaccggctgctg
tcccggtacgacacgctgatcatcgacgaggcgcacgagcgcagcctgaacatcgacttc
atcctcggctacgtcaagcagctgctgccgcgccgccccgacctgaaggtgatcatcacc
tcggccaccatcgacccggagcggttctcccggcacttcggcgacgcgccgatcgtcgag
gtgtccggccggacgtacccggtggagacccgctaccgcccggtcatcgaccccgaggac
ccggacgccgacccggaccgcgaccaggtgcaggcgatcgtcgacgcggtggacgagctc
caggccgagggccccggcgacatcctggtgttcctgtccggggagcgggagatccgcgac
accgccgacgcactgtccaaacaggacctccgcaacacggagatcctgccgctgtacgcc
cggctctccgtcggcgagcagcaccgggtgttccagcgccacaccggccgccgcgtcgtg
ctggccaccaacgtcgccgagacctcgctgacggtccccggcatcaagtacgtgatcgac
ccgggcaacgcccgcatctcccgctacagccaccgcctcaaggtgcagcggctgcccatc
gaacccatctcgcaggcctcggcgaaccagcgcaagggccgctgcggccgcgtgtcggag
ggcatctgcatccgcctctactcggaggaggacttcgagagccggccggagttcaccgac
gccgagatcctgcgtacgaatctcgcctccgtcatcctccagatgatcgcggccggcctc
ggcgacatcgccgccttcccgttcatcgacccgcccgaccgccgcaacatcaacgacggc
atcggcctgctccaggagctcggcgcgctggagaacggcaagctgacgggcatcggccgc
cgcctctcgcagctcccggtcgacccccggctggcccgcatggtcgtcgccgccgaggag
aacggctgcgtgcgcgaggtcatggtgatcgccgccgcactgtccattcaggacccgcgc
gaacggcccaccgagcaacaggagcaggcgcagcagcagcacgcccggttccgcgacccc
gacagcgacttcatcagcttcctcaacctctggaactacctgcgggagcagcagaaggag
ctgtcctccaaccagttccgcaagatgtgccgggccgagttcctgaactacctgcgggtc
cgcgagtggcaggacatctattcgcagctgcgccaggtggtcaagggccagggcgtgtcc
gtcaacggcggcgagatcgacaccaagggcatccacctgtcgctgctcgccggcctgctc
tcgcacctgggcatgaaggacgtcatcacgaagggcgtgcccacgaaggggtcgatccgc
aaggggcccaccgagtacctgggcgcgcgcggcgcgaagttcgcgatcttcccgggctcg
gcgctgtcccggcagcagccgcaatgggtgatggccgccgagctcgtcgagacgtcgagg
ctgtgggcccgcaccgtggccaagatcgagccggagtgggccgagaagctcggcgcgcac
ctggtcaagcgcagttacagcgagccgcactgggaggcccggcagggcgcggtgatcgcc
accgagaaggtcaccctgtacggcctgccgatcgtcgccgcgcgccggatcaactacggc
cggatcgacccggaggtgagccgcgagctgttcatccggcacgcgctcgtggacggcgaa
tggcgcaccagccaccagttcttccaccacaaccgcaagctgctcgacgacgtcgagaag
ctcgaggaccgggtccgccgccgcgacatcaaggtcgacgacgagacgctgttcgacttc
tacgacaagcgggtcggcgccgaggtggtgtcggtgcggcacttcgacacgtggtggcgc
aagacccgccgcgagcagcccgacctgctcaccttcgacccggagatgctggtcaacgac
agcgccggcggcatcaccgaggccgactacccggaccactggacgcagggcggcgtgcag
ctgccgctgacctaccggttcgagccgggccgccgcgatgacggcgtgaccgtgcgggtg
ccgctgccggtgctcgggcaggtcgacggggacggcctggcctggcagatccccggcctg
cggctggagctggtcacctcgctgatcaagtcgctgcccaagcagctgcgcaagaacttc
gtgccggtgccgaccttcgccaaggccgtggtggaccggatcggcgcggacgaccagcac
gtgctggaggccgtcgagcgggagctgcgcaccctgtccggggtggcgatcccgcgcgag
gcctggcagctggaccaggtgcccgagcacctcaagaccaccttccacgtggtcgacgag
ggggaccgcacgctggccgcgggcaaggacctggcggcgatcaaggaggacctgcgggcc
accatgcgcgccgcgctgtccgccgcccccaacgacatcgagcgcaccggcctgacgacc
tgggacttcggcacgctgccgcgcacgcaccgccaggccgtcacgggctacgaggtcacc
acctatccgtcgctggtcgaccgcggcgaccacgtggacgtgaagctgctggacagcgcc
gcccagcagcgggcggcgatgaagctcggcacccggcgcctgctgctgctccagctgccg
tcgccggtgaagctgatcgtccgcagcctgagcaacgacgccaagctgacgttgagccgc
aacccgcacggcggcgtgccggcgctgctcgcggactgcgcggcgaccgccgtggacaag
ctcgtcgccgacggcggcggtcccgtcttcgaccaggccggcttcgagaaactgctggtc
agggcccgtcaggggctgaacgagaccgtgctggaggtcgtgaagcgggtccgcaaggtc
ctcgacgccgcgcaggcggccgagcggcagctggcggcgaccaagttcgcgccggacgcc
tccgtcgccgacatccgggcgcagctcagggacctggtgcacgccgatttcgcgcaggag
accggctaccagcggctgccggacgtggagcgctacctccgggcgatcgaacgccggctg
gacaagctgcccgagaacccgcagcgggacgtgcagcgcaccgaggagatcgccgagatc
accgccgagtaccgggcgctggtcgacgcggtgcccgacggcgagccggtggaggcgccg
ctgcgaagcatcggctggatgatccaggagctgcgggtcagctacttcgcgcagaccctc
ggcaccgcctacccggtgtccgagaaacggatctacaaggcgatggacgagctgtga
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